Contig View

Back [Phalaenopsis Transcriptome]

Library Name: Contig Lists:

Contig Information:

Project Name	Query Name	Length of query
FEVCP	FEVCPM011_F09_PDNRF	1147

Contig Map:

(ProjectName=FEVCP
SequenceName=NoContigFind):

Sequences View:[NoContigFind](Contig Seguence)

Sequences View:[FEVCPM011_F09_PDNRF](Singleton Sequence)

FEVCPM011_F09_PDNRF 1147  bases 
GATGTTATTGATAAACATGATGTTGTGATTTTGCCTGCATTTGGTGCGGCGGTTGATGAGATGTATGCCTTAAGCCAGAAGAATGTACAGATGGTTGATACGACTTGCCCATGGGTATCAAAGGTCTGGAACACGGTTGAGAAGCACAAGCAGGGAGATTATACTTCGATAATTTATGGCAAGTACTCTCATGAAGAGACTGTGGCCACCTCGTCTTTTGCAGCAAAGTACATAGTTGTGAAAAACATCAAAGAGGCAATGTACGTATGTGATTACACTCTGGGAGGCCAGCTTGATGGATCTAGCTCAACTAAAGAGGATTTTCTTGAGAAATTCAAGTATGCTGTCTCTCTAGGCTTTGATCCCGATGTAGATCTAGTAAAAGTTGGCATTGCAAACCAAACAACAATGCTCAAGACTGAGACAGAAGAAATTGGTAAATTGGTAGAGAAGACTATGATGCGTAAATATGGAGTAAGAATCATTAACGAACACTTCAAAGGCTTTAACACAATATGTGATGCTACTCAGGAGAGACAAGATGCCATGAACAAGCTGGTTCAGAATAAGCTTGATCTGATCCTAGTTGTTGGTGGGTGGAATTCAAGCAATACCTCACATTTGCAAGAGATTGCTGAAATCAATGGAATCCCATCTTATTGGATAGACAATGAAAAGAGAATTGGACTGGGAAACAAGATAACCTATAAATTGCTTCATGGGGAGCTTGTTGAGAAGGAAGACTTTCCTACCTTTGGGATCTATTACAATTGGAATAACATCAGGCGCTTCAACACCAGACAAGGTTGTGGAAGATGTTCTGATCAAGTTGTTTGACATAAGCATAACGAATTCCTGCAAAGGGCATAGACAGAAACATATCTCCTGTAATTTATAGCTGCTACCTCTGTTTAAACCAACGCTTGTGCTGCTTCAAGTACCGAACTTTATTTCTGCAGCCGTCGCTACCAGGTTCTGCTGCCTCAAGTTTTAAAACCTTATTGAGCTGGGAAGTCAAACTTAAGAATACAACCTCCTTTACTGCATGATGCACCAAATCATATTGTTTTTATGTTTCGCATCTGATACATCTACGAGATATTGAAATAAATTACTGTATTCAAAAAAAAAAAAAAAAAAAAAAAAA

Contig Annotation:

GenBank	Accession number (Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
gb	ACJ83115.1	hydroxymethylbutenyl diphosphate reductase	Oncidium hybrid cultivar	463	466 bits (1199)	e-141	226/249 (90%)	241/249 (96%)	+1

KEGG Pathway	GO
NoContigFind[1 Pathway]	NoContigFind[54 GoTerm]

Pathway Informations
First-level terms	Second-level terms	KEGG pathway Num	KEGG pathway Name	KEGG pathway Description	contig Name	locusName	project Name
Metabolism	Metabolism of Terpenoids and Polyketides	00900	Terpenoid backbone biosynthesis	[PATH:ath00900]	FEVCPM011_F09_PDNRF	AT4G34350	FEVCP

GO Informations
Locus Name	Go Name	Go Class Descriptions	GO id	Anotations01
AT4G34350	AT4G34350	chloroplast	GO:0009507	chloroplast
AT4G34350	AT4G34350	chloroplast stroma	GO:0009570	plastid
AT4G34350	AT4G34350	chloroplast stroma	GO:0009570	chloroplast
AT4G34350	AT4G34350	chloroplast stroma	GO:0009570	other cytoplasmic components
AT4G34350	AT4G34350	chloroplast stroma	GO:0009570	other intracellular components
AT4G34350	AT4G34350	chloroplast stroma	GO:0009570	plastid
AT4G34350	AT4G34350	chloroplast stroma	GO:0009570	chloroplast
AT4G34350	AT4G34350	chloroplast stroma	GO:0009570	other cytoplasmic components
AT4G34350	AT4G34350	chloroplast stroma	GO:0009570	other intracellular components
AT4G34350	AT4G34350	"isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway"	GO:0019288	other cellular processes
AT4G34350	AT4G34350	"isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway"	GO:0019288	other metabolic processes
AT4G34350	AT4G34350	"isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway"	GO:0019288	other cellular processes
AT4G34350	AT4G34350	"isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway"	GO:0019288	other metabolic processes
AT4G34350	AT4G34350	"isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway"	GO:0019288	other cellular processes
AT4G34350	AT4G34350	"isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway"	GO:0019288	other metabolic processes
AT4G34350	AT4G34350	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity	GO:0046429	other enzyme activity
AT4G34350	AT4G34350	response to antibiotic	GO:0046677	other biological processes
AT4G34350	AT4G34350	4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity	GO:0051745	other enzyme activity
AT4G34350	AT4G34350	chloroplast	GO:0009507	chloroplast
AT4G34350	AT4G34350	chloroplast stroma	GO:0009570	plastid
AT4G34350	AT4G34350	chloroplast stroma	GO:0009570	chloroplast
AT4G34350	AT4G34350	chloroplast stroma	GO:0009570	other cytoplasmic components
AT4G34350	AT4G34350	chloroplast stroma	GO:0009570	other intracellular components
AT4G34350	AT4G34350	chloroplast stroma	GO:0009570	plastid
AT4G34350	AT4G34350	chloroplast stroma	GO:0009570	chloroplast
AT4G34350	AT4G34350	chloroplast stroma	GO:0009570	other cytoplasmic components
AT4G34350	AT4G34350	chloroplast stroma	GO:0009570	other intracellular components
AT4G34350	AT4G34350	"isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway"	GO:0019288	other cellular processes
AT4G34350	AT4G34350	"isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway"	GO:0019288	other metabolic processes
AT4G34350	AT4G34350	"isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway"	GO:0019288	other cellular processes
AT4G34350	AT4G34350	"isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway"	GO:0019288	other metabolic processes
AT4G34350	AT4G34350	"isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway"	GO:0019288	other cellular processes
AT4G34350	AT4G34350	"isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway"	GO:0019288	other metabolic processes
AT4G34350	AT4G34350	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity	GO:0046429	other enzyme activity
AT4G34350	AT4G34350	response to antibiotic	GO:0046677	other biological processes
AT4G34350	AT4G34350	4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity	GO:0051745	other enzyme activity
AT4G34350	AT4G34350	chloroplast	GO:0009507	chloroplast
AT4G34350	AT4G34350	chloroplast stroma	GO:0009570	plastid
AT4G34350	AT4G34350	chloroplast stroma	GO:0009570	chloroplast
AT4G34350	AT4G34350	chloroplast stroma	GO:0009570	other cytoplasmic components
AT4G34350	AT4G34350	chloroplast stroma	GO:0009570	other intracellular components
AT4G34350	AT4G34350	chloroplast stroma	GO:0009570	plastid
AT4G34350	AT4G34350	chloroplast stroma	GO:0009570	chloroplast
AT4G34350	AT4G34350	chloroplast stroma	GO:0009570	other cytoplasmic components
AT4G34350	AT4G34350	chloroplast stroma	GO:0009570	other intracellular components
AT4G34350	AT4G34350	"isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway"	GO:0019288	other cellular processes
AT4G34350	AT4G34350	"isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway"	GO:0019288	other metabolic processes
AT4G34350	AT4G34350	"isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway"	GO:0019288	other cellular processes
AT4G34350	AT4G34350	"isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway"	GO:0019288	other metabolic processes
AT4G34350	AT4G34350	"isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway"	GO:0019288	other cellular processes
AT4G34350	AT4G34350	"isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway"	GO:0019288	other metabolic processes
AT4G34350	AT4G34350	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity	GO:0046429	other enzyme activity
AT4G34350	AT4G34350	response to antibiotic	GO:0046677	other biological processes
AT4G34350	AT4G34350	4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity	GO:0051745	other enzyme activity

Gene Network Informations
Gene Network	Interact with..
FEVCPM011_F09_PDNRF[interact with..]	Not found!