Contig View

Back [Phalaenopsis Transcriptome]

Library Name: Contig Lists:

Contig Information:

Project Name	Query Name	Length of query
FEVCP	FEVCPM007_D11_PDNRF	978

Contig Map:

(ProjectName=FEVCP
SequenceName=NoContigFind):

Sequences View:[NoContigFind](Contig Seguence)

Sequences View:[FEVCPM007_D11_PDNRF](Singleton Sequence)

FEVCPM007_D11_PDNRF 978  bases 
TCCTCCTCCGCCGCGTCGTCGCCTCTTCCGCGGAGCGCACCGCCGCCGCCACTAACATAGCAGCCCGCCTTGTTCCAACACAGTGGATTTCCTCGCAGGCGGAGCCTGCCTCATCGAAGCCGAAGAAGATGAAGACGTTCTCGATCTACCGTTGGAATCCCGACAATCCGACGACGAAGCCGCAGCTCCGTGACTACGAATTGGATCTCAGCGAGTGCGGGCCGATGGTCCTCGACGCATTGATCAAGATAAAAAATGAGATGGATCCGAGCCTCACCTTTCGGCGATCGTGCCGCGAGGGGATCTGCGGTTCCTGCGCCATGAATATGGATGGAGACAATGGGCTGGCGTGCCTCACTAAGATCCGCTCGGAGAGCGGTACGGCAACTACGATCACGCCGCTGCCGCACATGTTTGTCATCAAGGATCTTGTGGTAGACATGACCAACTTCTACTTGCAGTATAAGAGCGTGGAACCGTGGCTGAAGCTCAAGGACGCGCCTGCAGTGCCGGGGAAGGAGAATCTCCAAAGCAAGAAGGATCGGGCCAAGCTGGACGGCATGTACGAGTGCATTCTTTGTGCTTGCTGTACCACATCCTGCCCTAGCTACTGGTGGAATCCGGAGTCCTACCTTGGCCCGGCCGCCCTTCTACAGGCCGATAGATGGATTCAAGACAGCCGCGACCAGTATACAAAGGAACGTCTGGATGCCATCAATGATGAATTTAAACTGTATCGGTGCCATACCATAAAGAACTGTGTGCACGCCTGTCCAAGGGATTAAATCCTGCAAGCAGATTGAATCAATTAAAAGCTTCAGCTCAAGCAGTAGCTGCTCTCATATATTTTGTAGCCACTCCAATTCCTCCGATCAAGCTGATTTTACGCCCCTTTCTTCTGCGCTTCTGCTGATAATCATATTGAATGTACCAACTGGATAATCATGCCCCGAATCTTATGTTGGGAAAATAAAGGCG

Contig Annotation:

GenBank	Accession number (Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
emb	CAD62367.1	succinate dehydrogenase	Triticum aestivum	281	410 bits (1054)	e-112	185/225 (82%)	205/225 (91%)	+3

KEGG Pathway	GO
NoContigFind[2 Pathway]	NoContigFind[40 GoTerm]

Pathway Informations
First-level terms	Second-level terms	KEGG pathway Num	KEGG pathway Name	KEGG pathway Description	contig Name	locusName	project Name
Metabolism	Carbohydrate Metabolism	00020	Citrate cycle (TCA cycle)	[PATH:ath00020]	FEVCPM007_D11_PDNRF	AT5G40650	FEVCP
Metabolism	Energy Metabolism	00190	Oxidative phosphorylation	[PATH:ath00190]	FEVCPM007_D11_PDNRF	AT5G40650	FEVCP

GO Informations
Locus Name	Go Name	Go Class Descriptions	GO id	Anotations01
AT5G40650	AT5G40650	mitochondrion	GO:0005739	mitochondria
AT5G40650	AT5G40650	mitochondrion	GO:0005739	mitochondria
AT5G40650	AT5G40650	mitochondrion	GO:0005739	mitochondria
AT5G40650	AT5G40650	electron carrier activity	GO:0009055	other molecular functions
AT5G40650	AT5G40650	succinate dehydrogenase activity	GO:0000104	other enzyme activity
AT5G40650	AT5G40650	zinc ion binding	GO:0008270	other binding
AT5G40650	AT5G40650	"mitochondrial electron transport, succinate to ubiquinone"	GO:0006121	other cellular processes
AT5G40650	AT5G40650	"mitochondrial electron transport, succinate to ubiquinone"	GO:0006121	other metabolic processes
AT5G40650	AT5G40650	"mitochondrial electron transport, succinate to ubiquinone"	GO:0006121	electron transport or energy pathways
AT5G40650	AT5G40650	succinate dehydrogenase complex	GO:0045281	other intracellular components
AT5G40650	AT5G40650	mitochondrion	GO:0005739	mitochondria
AT5G40650	AT5G40650	mitochondrion	GO:0005739	mitochondria
AT5G40650	AT5G40650	mitochondrion	GO:0005739	mitochondria
AT5G40650	AT5G40650	electron carrier activity	GO:0009055	other molecular functions
AT5G40650	AT5G40650	succinate dehydrogenase activity	GO:0000104	other enzyme activity
AT5G40650	AT5G40650	zinc ion binding	GO:0008270	other binding
AT5G40650	AT5G40650	"mitochondrial electron transport, succinate to ubiquinone"	GO:0006121	other cellular processes
AT5G40650	AT5G40650	"mitochondrial electron transport, succinate to ubiquinone"	GO:0006121	other metabolic processes
AT5G40650	AT5G40650	"mitochondrial electron transport, succinate to ubiquinone"	GO:0006121	electron transport or energy pathways
AT5G40650	AT5G40650	succinate dehydrogenase complex	GO:0045281	other intracellular components
AT5G40650	AT5G40650	mitochondrion	GO:0005739	mitochondria
AT5G40650	AT5G40650	mitochondrion	GO:0005739	mitochondria
AT5G40650	AT5G40650	mitochondrion	GO:0005739	mitochondria
AT5G40650	AT5G40650	electron carrier activity	GO:0009055	other molecular functions
AT5G40650	AT5G40650	succinate dehydrogenase activity	GO:0000104	other enzyme activity
AT5G40650	AT5G40650	zinc ion binding	GO:0008270	other binding
AT5G40650	AT5G40650	"mitochondrial electron transport, succinate to ubiquinone"	GO:0006121	other cellular processes
AT5G40650	AT5G40650	"mitochondrial electron transport, succinate to ubiquinone"	GO:0006121	other metabolic processes
AT5G40650	AT5G40650	"mitochondrial electron transport, succinate to ubiquinone"	GO:0006121	electron transport or energy pathways
AT5G40650	AT5G40650	succinate dehydrogenase complex	GO:0045281	other intracellular components
AT5G40650	AT5G40650	mitochondrion	GO:0005739	mitochondria
AT5G40650	AT5G40650	mitochondrion	GO:0005739	mitochondria
AT5G40650	AT5G40650	mitochondrion	GO:0005739	mitochondria
AT5G40650	AT5G40650	electron carrier activity	GO:0009055	other molecular functions
AT5G40650	AT5G40650	succinate dehydrogenase activity	GO:0000104	other enzyme activity
AT5G40650	AT5G40650	zinc ion binding	GO:0008270	other binding
AT5G40650	AT5G40650	"mitochondrial electron transport, succinate to ubiquinone"	GO:0006121	other cellular processes
AT5G40650	AT5G40650	"mitochondrial electron transport, succinate to ubiquinone"	GO:0006121	other metabolic processes
AT5G40650	AT5G40650	"mitochondrial electron transport, succinate to ubiquinone"	GO:0006121	electron transport or energy pathways
AT5G40650	AT5G40650	succinate dehydrogenase complex	GO:0045281	other intracellular components

Gene Network Informations
Gene Network	Interact with..
FEVCPM007_D11_PDNRF[interact with..]	Not found!