Contig View

Back [Phalaenopsis Transcriptome]

Library Name: Contig Lists:

Contig Information:

Project Name	Query Name	Length of query
FEVCP	FEVCPM006_A12_PDNRF	1086

Contig Map:

(ProjectName=FEVCP
SequenceName=NoContigFind):

Sequences View:[NoContigFind](Contig Seguence)

Sequences View:[FEVCPM006_A12_PDNRF](Singleton Sequence)

FEVCPM006_A12_PDNRF 1086  bases 
GACTGCGCGTGCTTTTCTTCTCTCCTTCCGGATCCGGCGGATCGAGAACCACCTTCATGGCCTCCTCCACCGAATCCAATCATGGTGTCGACGGATCTACGCCTACAAACGGGACATTAGCGGCTGCAGCCAAGATCCCGCCGACCCTCTCCCCACAGCGTAAGGTGGCGCTGATCACCGGAATCACTGGACAAGACGGGTCCTACCTCACGGAGTTCCTCCTGGGCAAGGGTTATGAAGTCCATGGCCTCATCCGCAGATCCTCCAACTTCAACACCGCTCGCCTCGATCATCTCTATGTCGACCCCCACAACTCCCACAAAGCCCGCATGAAGCTCCATTATGCCGATCTCTCCGACGCTTCTTCTCTGCGCCGATGGGTTGATACCCTCCTCCCCGACGAGGTTTACAACCTCGCCGCTCAATCCCACGTCGCCGTGTCATTTGAGATCCCCGATTATACCGCTGATGTCGTCGCCACCGGCACCTTACGCCTTCTCGAAGCCGTCCGATCATCCTCCAAGAAGAGGATGCGCTATTACCAGGCCGGGTCCTCGGAGATGTTCGGATCCACGCCACCGCCTCAATCCGAGACCTCCCCTTTCCACCCCCGATCGCCCTACGCGGCCGCCAAGTGCGCTGCGCATTGGTACACTGTCAACTACCGCGAGGCCTACGGCCTCTTCGCTTGCAACGGCATACTCTTTAATCACGAGAGCCACGCCGTGGGGAGAATTTCGTCACCAGAAAGATCACTCGTGCTGTCGGGCCGTATCAAGGTCGGTTTGCAGACCAAGCTATTTCCTTGGAAACCTATCTGCAGCCAGGGACTGGGGTTTCGCAGGCGATTATGTTGAGGCAATGTGATGATGTTGCAGCAGGACAAGCCTGGGATTTTGTGGTGGCAACTGAGGATTCGCATTCTGTGGAAGGAGTTTTCTCGAGAGGCATTCGACATGTGGAGTTGGATTGAAGGGATCATGTGGGATCCGATAAAGTACCTCAGACCTGCAAGGTGTAGCTGAAAGTGATTCAACAAAGCAGGAGTCGCTGGCTGACCTGAGTTGTTCAGACTGGAGATGATGT

Contig Annotation:

GenBank	Accession number (Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
ref	XP_002269841.1	PREDICTED: hypothetical protein	Vitis vinifera	373	382 bits (982)	e-104	205/311 (65%)	229/311 (73%), Gaps = 6/311 (1%)	+3

KEGG Pathway	GO
NoContigFind[2 Pathway]	NoContigFind[18 GoTerm]

Pathway Informations
First-level terms	Second-level terms	KEGG pathway Num	KEGG pathway Name	KEGG pathway Description	contig Name	locusName	project Name
Metabolism	Carbohydrate Metabolism	00520	Amino sugar and nucleotide sugar metabolism	[PATH:ath00520]	FEVCPM006_A12_PDNRF	AT3G51160	FEVCP
Metabolism	Carbohydrate Metabolism	00051	Fructose and mannose metabolism	[PATH:ath00051]	FEVCPM006_A12_PDNRF	AT3G51160	FEVCP

GO Informations
Locus Name	Go Name	Go Class Descriptions	GO id	Anotations01
AT3G51160	AT3G51160	cytosol	GO:0005829	cytosol
AT3G51160	AT3G51160	"GDP-mannose 4,6-dehydratase activity"	GO:0008446	other enzyme activity
AT3G51160	AT3G51160	"GDP-mannose 4,6-dehydratase activity"	GO:0008446	other enzyme activity
AT3G51160	AT3G51160	unidimensional cell growth	GO:0009826	other cellular processes
AT3G51160	AT3G51160	'de novo' GDP-L-fucose biosynthetic process	GO:0042351	other cellular processes
AT3G51160	AT3G51160	'de novo' GDP-L-fucose biosynthetic process	GO:0042351	other metabolic processes
AT3G51160	AT3G51160	cytosol	GO:0005829	cytosol
AT3G51160	AT3G51160	"GDP-mannose 4,6-dehydratase activity"	GO:0008446	other enzyme activity
AT3G51160	AT3G51160	"GDP-mannose 4,6-dehydratase activity"	GO:0008446	other enzyme activity
AT3G51160	AT3G51160	unidimensional cell growth	GO:0009826	other cellular processes
AT3G51160	AT3G51160	'de novo' GDP-L-fucose biosynthetic process	GO:0042351	other cellular processes
AT3G51160	AT3G51160	'de novo' GDP-L-fucose biosynthetic process	GO:0042351	other metabolic processes
AT3G51160	AT3G51160	cytosol	GO:0005829	cytosol
AT3G51160	AT3G51160	"GDP-mannose 4,6-dehydratase activity"	GO:0008446	other enzyme activity
AT3G51160	AT3G51160	"GDP-mannose 4,6-dehydratase activity"	GO:0008446	other enzyme activity
AT3G51160	AT3G51160	unidimensional cell growth	GO:0009826	other cellular processes
AT3G51160	AT3G51160	'de novo' GDP-L-fucose biosynthetic process	GO:0042351	other cellular processes
AT3G51160	AT3G51160	'de novo' GDP-L-fucose biosynthetic process	GO:0042351	other metabolic processes

Gene Network Informations
Gene Network	Interact with..
FEVCPM006_A12_PDNRF[interact with..]	Not found!