Contig View

Back [Phalaenopsis Transcriptome]

Library Name: Contig Lists:

Contig Information:

Project Name	Query Name	Length of query
FEVCP	FEVCPM001_A11_PDNRF	453

Contig Map:

(ProjectName=FEVCP
SequenceName=NoContigFind):

Sequences View:[NoContigFind](Contig Seguence)

Sequences View:[FEVCPM001_A11_PDNRF](Singleton Sequence)

Contig Annotation:

GenBank	Accession number (Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
sp	P83522.1	FER_HORVU RecName: Full=Ferredoxin		97	110 bits (275)	5e-23	50/69 (72%)	58/69 (84%)	+3

KEGG Pathway	GO
NoContigFind[1 Pathway]	NoContigFind[15 GoTerm]

Pathway Informations
First-level terms	Second-level terms	KEGG pathway Num	KEGG pathway Name	KEGG pathway Description	contig Name	locusName	project Name
Metabolism	Energy Metabolism	00195	Photosynthesis	[PATH:ath00195]	FEVCPM001_A11_PDNRF	AT1G60950	FEVCP

GO Informations
Locus Name	Go Name	Go Class Descriptions	GO id	Anotations01
AT1G60950	AT1G60950	chloroplast	GO:0009507	chloroplast
AT1G60950	AT1G60950	electron carrier activity	GO:0009055	other molecular functions
AT1G60950	AT1G60950	iron-sulfur cluster binding	GO:0051536	other binding
AT1G60950	AT1G60950	"2 iron, 2 sulfur cluster binding"	GO:0051537	other binding
AT1G60950	AT1G60950	chloroplast stroma	GO:0009570	plastid
AT1G60950	AT1G60950	chloroplast stroma	GO:0009570	chloroplast
AT1G60950	AT1G60950	chloroplast stroma	GO:0009570	other cytoplasmic components
AT1G60950	AT1G60950	chloroplast stroma	GO:0009570	other intracellular components
AT1G60950	AT1G60950	response to light stimulus	GO:0009416	response to abiotic or biotic stimulus
AT1G60950	AT1G60950	photosynthetic electron transport chain	GO:0009767	other cellular processes
AT1G60950	AT1G60950	photosynthetic electron transport chain	GO:0009767	other metabolic processes
AT1G60950	AT1G60950	photosynthetic electron transport chain	GO:0009767	electron transport or energy pathways
AT1G60950	AT1G60950	photosynthetic electron transport chain	GO:0009767	other cellular processes
AT1G60950	AT1G60950	photosynthetic electron transport chain	GO:0009767	other metabolic processes
AT1G60950	AT1G60950	photosynthetic electron transport chain	GO:0009767	electron transport or energy pathways

Gene Network Informations
Gene Network	Interact with..
FEVCPM001_A11_PDNRF[interact with..]	FEVCPM007_F03_PDNRF FEVCPS006_H07_PDNRF FEVCPS025_A11_PDNR-F

Query Name	Length of query	GenBank	Accession number(Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
FEVCPM007_F03_PDNRF	644	ref	XP_002275771.1	PREDICTED: hypothetical protein isoform 2	Vitis vinifera	151	206 bits (524)	1e-51	105/152 (69%)	118/152 (77%), Gaps = 8/152 (5%)	+3
FEVCPS006_H07_PDNRF	676	ref	NP_001151112.1	ferredoxin	Zea mays	150	174 bits (442)	5e-42	81/104 (77%)	93/104 (89%)	+1
FEVCPS025_A11_PDNR-F	469	emb	CAO71173.1	unnamed protein product	Vitis vinifera	195	130 bits (326)	6e-29	59/70 (84%)	67/70 (95%)	+1