Contig View

Back [Phalaenopsis Transcriptome]

Library Name: Contig Lists:

Contig Information:

Project Name	Query Name	Length of query
FEVCP	Contig0619	663

Contig Map:

(ProjectName=FEVCP SequenceName=Contig0619):
FEVCPS032_B07_PDNR-F:
FEVCPM032_B07_PDNR-F:
FEVCPM001_F06_PDNRF:

Sequences View:[Contig0619](Contig Seguence)

Sequences View:[Contig0619](Singleton Sequence)

Contig Annotation:

GenBank	Accession number (Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
ref	XP_002524416.1	60S acidic ribosomal protein P1, putative	Ricinus communis	110	90.1 bits (222)	2e-16	39/61 (63%)	54/61 (88%)	+3

KEGG Pathway	GO
Contig0619[1 Pathway]	Contig0619[13 GoTerm]

Pathway Informations
First-level terms	Second-level terms	KEGG pathway Num	KEGG pathway Name	KEGG pathway Description	contig Name	locusName	project Name
Genetic Information Processing	Translation	03010	Ribosome	[PATH:ath03010]	Contig0619	AT5G24510	FEVCP

GO Informations
Locus Name	Go Name	Go Class Descriptions	GO id	Anotations01
AT5G24510	AT5G24510	ribosome	GO:0005840	ribosome
AT5G24510	AT5G24510	structural constituent of ribosome	GO:0003735	structural molecule activity
AT5G24510	AT5G24510	translational elongation	GO:0006414	protein metabolism
AT5G24510	AT5G24510	translational elongation	GO:0006414	other cellular processes
AT5G24510	AT5G24510	translational elongation	GO:0006414	other metabolic processes
AT5G24510	AT5G24510	cytosolic ribosome	GO:0022626	cytosol
AT5G24510	AT5G24510	cytosolic ribosome	GO:0022626	ribosome
AT5G24510	AT5G24510	cytosolic ribosome	GO:0022626	other cytoplasmic components
AT5G24510	AT5G24510	cytosolic ribosome	GO:0022626	other intracellular components
AT5G24510	AT5G24510	structural constituent of ribosome	GO:0003735	structural molecule activity
AT5G24510	AT5G24510	translational elongation	GO:0006414	protein metabolism
AT5G24510	AT5G24510	translational elongation	GO:0006414	other cellular processes
AT5G24510	AT5G24510	translational elongation	GO:0006414	other metabolic processes

Gene Network Informations
Gene Network	Interact with..
Contig0619[interact with..]	Not found!