Contig View

Back [Phalaenopsis Transcriptome]

Library Name: Contig Lists:

Contig Information:

Project Name	Query Name	Length of query
FEVCP	Contig0476	1086

Contig Map:

(ProjectName=FEVCP SequenceName=Contig0476):
FEVCPM031_D11_PDNR-F:
FEVCPM035_F03_PDNR-F:
FEVCPM007_A04_PDNRF:

Sequences View:[Contig0476](Contig Seguence)

1086 bases 
ATGGACAGCAAGTGAGCAACTTATGTTTCTCTTCTAATGTTGCTGATGTTGTGATGATATTTCACGCCTATCTACACCTTCTGTGTTTTTTCATCTTCTACAAATCTTTAGTGAATCCTCAATTCTTGATCCAACAGAGCTTGCAGAGTAAAGCGATGGCAGTAGAAGAGCAGATCCCACTTCTCAAACCCTACATAATGGGAAAATTTCATCTCTCCCACAGAATTGTACTGGCACCATTAACAAGGTCAAGATCCTTTGGTTACGTCCCCCAACCTCATGCCATCCTCTATTACTCTCAGAGGACAACCAAGGGAGGTCTTTTAATAACTGAAGCAGCAGGAGTTTCTGAAACAGCTCAAGGGTACCCAAACACACCAGGAATATGGACCAAAGAACAGGTAGAGGCCTGGAAACCCATTGTTAAGGCAGTGCATGACAAGGGTGGCATCTTCTTCTGCCAATTATGGCATGCTGGAAGAGTCTCCAGTTATGGTTACCAACCAAATGGACAAGCTCCTATATCGAGTACTGATAGGCCAATTCCTCCCCAGAAACAACATGATGACACCATTGCCGAGTATTCTATTCCACGACGTCTGGCAATCGAAGAGATCCCTCTGGTTGTTAATGATTTCCGACTTGCAGCAAGGAATGCCATTGAAGCCGGCTTTGATGGGGTAGAGATGCATGCTGCGCATGGTTACTTGATAGAACAACTCATGAAGGATAATGTAAATGATAGGACCGATGAATACGGTGGAAGCATAGAAAATCGATGTCGATTCACCCTCGAAATCATCAAGGCAGTCGCCGATGAGATCGGCGCCGAACGTGTGGGCATTCGACTGTCACCTTTCGCCGATTACATGGAATGTTGGGATTCAAATCCCGAACAATTGGGGCTTTACATGGTGCAATCATTGAACAAGTATGGCATTCTCTATTGCCATGTGGTTGAGCCAAGGATGTCAATTGTTGATGGAAGAGGCAGATTCCTCACCGCTTGCTTCCATGAGGAAGGCTTTCAATGGTACTTTTATTGCTGCAGGAGGATATGATAGAGGATTGAAGTTATAGGTGGTG

Sequences View:[Contig0476](Singleton Sequence)

Contig0476 1086  bases 
ATGGACAGCAAGTGAGCAACTTATGTTTCTCTTCTAATGTTGCTGATGTTGTGATGATATTTCACGCCTATCTACACCTTCTGTGTTTTTTCATCTTCTACAAATCTTTAGTGAATCCTCAATTCTTGATCCAACAGAGCTTGCAGAGTAAAGCGATGGCAGTAGAAGAGCAGATCCCACTTCTCAAACCCTACATAATGGGAAAATTTCATCTCTCCCACAGAATTGTACTGGCACCATTAACAAGGTCAAGATCCTTTGGTTACGTCCCCCAACCTCATGCCATCCTCTATTACTCTCAGAGGACAACCAAGGGAGGTCTTTTAATAACTGAAGCAGCAGGAGTTTCTGAAACAGCTCAAGGGTACCCAAACACACCAGGAATATGGACCAAAGAACAGGTAGAGGCCTGGAAACCCATTGTTAAGGCAGTGCATGACAAGGGTGGCATCTTCTTCTGCCAATTATGGCATGCTGGAAGAGTCTCCAGTTATGGTTACCAACCAAATGGACAAGCTCCTATATCGAGTACTGATAGGCCAATTCCTCCCCAGAAACAACATGATGACACCATTGCCGAGTATTCTATTCCACGACGTCTGGCAATCGAAGAGATCCCTCTGGTTGTTAATGATTTCCGACTTGCAGCAAGGAATGCCATTGAAGCCGGCTTTGATGGGGTAGAGATGCATGCTGCGCATGGTTACTTGATAGAACAACTCATGAAGGATAATGTAAATGATAGGACCGATGAATACGGTGGAAGCATAGAAAATCGATGTCGATTCACCCTCGAAATCATCAAGGCAGTCGCCGATGAGATCGGCGCCGAACGTGTGGGCATTCGACTGTCACCTTTCGCCGATTACATGGAATGTTGGGATTCAAATCCCGAACAATTGGGGCTTTACATGGTGCAATCATTGAACAAGTATGGCATTCTCTATTGCCATGTGGTTGAGCCAAGGATGTCAATTGTTGATGGAAGAGGCAGATTCCTCACCGCTTGCTTCCATGAGGAAGGCTTTCAATGGTACTTTTATTGCTGCAGGAGGATATGATAGAGGATTGAAGTTATAGGTGGTG

Contig Annotation:

GenBank	Accession number (Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
ref	XP_002327289.1	predicted protein	Populus trichocarpa	370	426 bits (1094)	e-122	203/273 (74%)	233/273 (85%), Gaps = 1/273 (0%)	+3

KEGG Pathway	GO
Contig0476[1 Pathway]	Contig0476[6 GoTerm]

Pathway Informations
First-level terms	Second-level terms	KEGG pathway Num	KEGG pathway Name	KEGG pathway Description	contig Name	locusName	project Name
Metabolism	Lipid Metabolism	00592	alpha-Linolenic acid metabolism	[PATH:ath00592]	Contig0476	AT1G76690	FEVCP

GO Informations
Locus Name	Go Name	Go Class Descriptions	GO id	Anotations01
AT1G76690	AT1G76690	cellular_component	GO:0005575	unknown cellular components
AT1G76690	AT1G76690	12-oxophytodienoate reductase activity	GO:0016629	other enzyme activity
AT1G76690	AT1G76690	response to wounding	GO:0009611	response to stress
AT1G76690	AT1G76690	cellular_component	GO:0005575	unknown cellular components
AT1G76690	AT1G76690	12-oxophytodienoate reductase activity	GO:0016629	other enzyme activity
AT1G76690	AT1G76690	response to wounding	GO:0009611	response to stress

Gene Network Informations
Gene Network	Interact with..
Contig0476[interact with..]	FEVCPM028_C04_PDNR-F

Query Name	Length of query	GenBank	Accession number(Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
FEVCPM028_C04_PDNR-F	1011	emb	CAO65260.1	unnamed protein product	Vitis vinifera	389	425 bits (1092)	e-117	196/271 (72%)	233/271 (85%)	+3