Contig View

Back [Phalaenopsis Transcriptome]

Library Name: Contig Lists:

Contig Information:

Project Name	Query Name	Length of query
FEICP	EICPM055_G07_pDNR-F	1016

Contig Map:

(ProjectName=FEICP
SequenceName=NoContigFind):

Sequences View:[NoContigFind](Contig Seguence)

Sequences View:[EICPM055_G07_pDNR-F](Singleton Sequence)

EICPM055_G07_pDNR-F 1016  bases 
GGACGCGTCGGACCCCAAAAGGAGCATGCTTGTCGTCTCGGAGTTCATCGGTTGCTCTCCATCTCTCAGTGGAGCCATTCGTGTCAACCCATGGAACATCGATTCGGTTGCGGAAGCCATGGAAACTGCATTGGCAATAAGTTATAATGAGAAACAGTTGAGGCATGAAAAACATTATCGATACGTAAGCACACACGACGTCGGTTATTGGGCGAATAGCTTCTTGCAGGATTTGGAGAGGACATGCCGAGACCACGGAAGGAGGAGGTGTTGGGGAATTGGATTCGGTTTGGGCTTTCGAGTCATTGCGTTGGACCCCAACTTCAGAAAACTTTTTGATGAAAGGATTGTTTCGGCTTACAAGAGAACGAAGAACAGAGCAATCTTATTGGACTATGATGGTGCCATGATGCCTCAAACATCGATTAACAAGACGCCGACTCCCGAAGCTATTGGCATATTGAATAGCTTGTGCCGTGACCCGGATAATTTGGTGTTTCTGGTAAGCGGGAAGGATAAGGACACTCTTGGTGAGTGGTTCTCTCCGTGCAAAAAGCTTGCGCTTGCTGCCGAACATGGCTACTTCATAAGGCAAAATCAAGACTCGGAATGGGAGACACATGTGGCCGTATCTGATTTCGGCTGGAAACAAATCGCTGAACCTGTTATGAAATTATACACAGAAACAACTGATGGATCGAGCATAGAAGCTAAAGAAAGTGCATTGGTTTGGCACTATCAGTATGCAGATCCTGATTTTGGTTCATGCCAGGCCAAAGAACTTCTAGATCACCTGGAAAGTGTTCTATCCAATGAGCCCGTTTCTGTGAGAGTGCCACATTTTGTAGAGTAAAACCTCAGGTGTCACAAAGGGCATAGTTGCAGAGTGCCTCTCTCATTGATGCAGAGACGACAGCTTCCCGATTTCGTTCTATGCATGGTGATGATAGATCTGACGAGATATGTTTGAGGTGATCACAGTGCAGGGAAGGACTCACCTTATCGCCTGTCGCCGA

Contig Annotation:

GenBank	Accession number (Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
ref	XP_002304347.1	predicted protein	Populus trichocarpa	861	469 bits (1206)	e-130	233/314 (74%)	264/314 (84%), Gaps = 3/314 (0%)	+2

KEGG Pathway	GO
NoContigFind[1 Pathway]	NoContigFind[8 GoTerm]

Pathway Informations
First-level terms	Second-level terms	KEGG pathway Num	KEGG pathway Name	KEGG pathway Description	contig Name	locusName	project Name
Metabolism	Carbohydrate Metabolism	00500	Starch and sucrose metabolism	[PATH:ath00500]	EICPM055_G07_pDNR-F	AT1G68020	FEICP

GO Informations
Locus Name	Go Name	Go Class Descriptions	GO id	Anotations01
AT1G68020	AT1G68020	"alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity"	GO:0003825	transferase activity
AT1G68020	AT1G68020	trehalose-phosphatase activity	GO:0004805	hydrolase activity
AT1G68020	AT1G68020	trehalose-phosphatase activity	GO:0004805	hydrolase activity
AT1G68020	AT1G68020	trehalose biosynthetic process	GO:0005992	other cellular processes
AT1G68020	AT1G68020	trehalose biosynthetic process	GO:0005992	other metabolic processes
AT1G68020	AT1G68020	trehalose biosynthetic process	GO:0005992	other cellular processes
AT1G68020	AT1G68020	trehalose biosynthetic process	GO:0005992	other metabolic processes
AT1G68020	AT1G68020	"transferase activity, transferring glycosyl groups"	GO:0016757	transferase activity

Gene Network Informations
Gene Network	Interact with..
EICPM055_G07_pDNR-F[interact with..]	Not found!