Contig View

Back [Phalaenopsis Transcriptome]

Library Name: Contig Lists:

Contig Information:

Project Name	Query Name	Length of query
FEICP	EICPM020_F08_pDNR-F	1093

Contig Map:

(ProjectName=FEICP
SequenceName=NoContigFind):

Sequences View:[NoContigFind](Contig Seguence)

Sequences View:[EICPM020_F08_pDNR-F](Singleton Sequence)

EICPM020_F08_pDNR-F 1093  bases 
CTTCTACGGCCGGGGTGAACTAGAGTCAGCACAGGCAAAAAATCAAGCTCTATTGGAAGCTGGAGCAATTGTCCCAACTTCTTATGAAGCATTTGAGGCTGCAATTAAAGATACTTTTGATAAGCTTTTTGAAGAAGGGAAGATCACCCCTGTGGCTGAAGTTCAACCTCCTGAAATTCCGGAGGATCTTAGCTTTGCAATTAAAAGTGGGAAGGTCCGGGCCCCAACTCACATCGTCTCTACTATCTCGGATGATAGAGGTGATGAACCGTGTTATGCTGGCGTACCCATGTCTACCATTATCGAACGTGGTTTTAGCGTTGGCGATGTTATCTCTCTTTTATGGTTCAAACGTAGCCTTCCTCGCTATTGCACACAATTCGTAGAGATTTGTATCATGTTGTGTGCTGACCATGGTCCCTGTGTCTCTGGAGCTCATAACACTATAGTCACAGCGAGGGCTGGGAAGGACCTTGTTTCGAGCCTTGTTTCTGGGCTTCTCACAATTGGTCCTAGATTTGGTGGTGCAATTGATGATGCTGCCCGATATTTTAAGGATGCTCATGACCGGGGTCTTACTCCTTATGAATTTGTGGAGGGCATGAAGAAGAAGGGCATCAGGGTACCCGGAATTGGTCACAGGATTAAGAGTAGGGATAATAGGGACAAGAGAGTTCAGCTGTTGCAGCGATATGCACACACTCATTTCCCTTCTGTGAAGTACATGGATTATGCTGTTCAAGTTGAGAACTATACGTTATCAAAGGCGAACAACTTGGTTTTAAACGTTGATGGCGCCATTGGATCCCTTTCCTTGGATCTACTTTCAGGCAGTGGAATGTTCACCAAGCAGGAGATCGACGAAATAGTCGACATCGGATATTGAATGGACTTTTTGTCCTTGCGCGCTCTATCGGTCTCATAGGGCACACCTTTGATCAGAAAGTTGAAGCAGCCGCTTTACCGCCACCCGTGGGAGATGTTCTTTATACAAAATGATCACTTTGCGCCTGCTGTAGCACATCTGCTGTGCTGGATTTAATTTTTTTTTTTTTGAGTTTATCACATTTTATCAGATAATGCTTAAGGGGGT

Contig Annotation:

GenBank	Accession number (Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
gb	ABN07962.1	ATP-citrate lyase/succinyl-CoA ligase	Medicago truncatula	608	519 bits (1337)	e-145	257/323 (79%)	284/323 (87%), Gaps = 1/323 (0%)	+2

KEGG Pathway	GO
NoContigFind[1 Pathway]	NoContigFind[18 GoTerm]

Pathway Informations
First-level terms	Second-level terms	KEGG pathway Num	KEGG pathway Name	KEGG pathway Description	contig Name	locusName	project Name
Metabolism	Carbohydrate Metabolism	00020	Citrate cycle (TCA cycle)	[PATH:ath00020]	EICPM020_F08_pDNR-F	AT3G06650	FEICP

GO Informations
Locus Name	Go Name	Go Class Descriptions	GO id	Anotations01
AT3G06650	AT3G06650	citrate lyase complex	GO:0009346	other cytoplasmic components
AT3G06650	AT3G06650	citrate lyase complex	GO:0009346	other intracellular components
AT3G06650	AT3G06650	ATP citrate synthase activity	GO:0003878	transferase activity
AT3G06650	AT3G06650	acetyl-CoA biosynthetic process	GO:0006085	other cellular processes
AT3G06650	AT3G06650	acetyl-CoA biosynthetic process	GO:0006085	other metabolic processes
AT3G06650	AT3G06650	membrane	GO:0016020	other membranes
AT3G06650	AT3G06650	citrate lyase complex	GO:0009346	other cytoplasmic components
AT3G06650	AT3G06650	citrate lyase complex	GO:0009346	other intracellular components
AT3G06650	AT3G06650	ATP citrate synthase activity	GO:0003878	transferase activity
AT3G06650	AT3G06650	acetyl-CoA biosynthetic process	GO:0006085	other cellular processes
AT3G06650	AT3G06650	acetyl-CoA biosynthetic process	GO:0006085	other metabolic processes
AT3G06650	AT3G06650	membrane	GO:0016020	other membranes
AT3G06650	AT3G06650	citrate lyase complex	GO:0009346	other cytoplasmic components
AT3G06650	AT3G06650	citrate lyase complex	GO:0009346	other intracellular components
AT3G06650	AT3G06650	ATP citrate synthase activity	GO:0003878	transferase activity
AT3G06650	AT3G06650	acetyl-CoA biosynthetic process	GO:0006085	other cellular processes
AT3G06650	AT3G06650	acetyl-CoA biosynthetic process	GO:0006085	other metabolic processes
AT3G06650	AT3G06650	membrane	GO:0016020	other membranes

Gene Network Informations
Gene Network	Interact with..
EICPM020_F08_pDNR-F[interact with..]	Not found!