Contig View

Back [Phalaenopsis Transcriptome]

Library Name: Contig Lists:

Contig Information:

Project Name	Query Name	Length of query
FEICP	Contig3850	1442

Contig Map:

(ProjectName=FEICP SequenceName=Contig3850):
EICPM019-F8_pDNR-R:
EICPM019_F08_pDNR-F:

Sequences View:[Contig3850](Contig Seguence)

1442 bases 
ATAAATGCATGGTATTCGGCCATTACGGCCGGGGAGAACAGAGAGTACGATTTCTTTGTTCTGTGGTTTTGGGAGGGAATGGCTCCAGCGCCTCTCTTCACTCGCTACAAAATGGGATCTTTCGATCTTTCCCATAGAGTAGTGCTGGCACCACTGACGAGGCAGAGGTCCTTTGGCAATATCCCTCAACCCCATGCGATCTTATATTACTCTCAGAGAGCCTCCCAAGGCGGTCTTCTAATAGCTGAAGCCACCGGAATTTCAGATACTGCCCAAGGGTATGCATCCACACCTGGAATATGGTCCAAAGAGCAGGTGGAAGCATGGAAACCCATCGTAGATGCAGTTCACGAAAAGGGTGGTATCTTCTTTTGTCAAATTTGGCATGTCGGGAGGGTTTCAAATTATGATTTTCAACCTAATGGGCAGGCTCCAATCTCATCTACTGATAAACCACTAAAGCCTGTAGTCCGAGCCAATGGTATTGATGTTTCAACTTTCTCTCCTCCTCGGCGCTTGTCAACAGGAGAAATCCCAGGTGTTGTCAATGATTTCAGGAAAGCAGCAAGGAATGCCATTGAAGCTGGCTTTGATGGAGTTGAGATCCACGGAGCTCATGGATATTTAATCGACCAATTTCTGAAGGATCAAGTCAATGATCGAATTGATAAGTATGGTGGCAGCCTCGAGAATCGCTGCCGCTTCGCCCTGGAGGTAGTTGAAGCTGTTGTCAATGAGATCGGTGCCAACAAGGTCGGCATAAGGCTATCTCCATTCGCCGCCTACTCCGAAGCTGGGGATTCAAACCCAGAAGCACTCGGCCTCTACATGGCCAACTCACTTAACAAATATAGGATTCTCTACTGTCATATGGTGGAGCCTAGGATGATTACAGTGGGAGAGAAGATAGAGACTCCCCATTCTCTCTACCCAATGAGGAGAGCATTTAAGGGAACATTTATAGTTGCAGGAGGATATGACAGGGAAGATGGGAATAAGGCCATTGCTAGTAATTATGCAGATCTGGTTGCATACGGTCGGGTGTTCTTGGCTAATCCTGATCTTCCTCGAAGGTTCGAGCTCGATGCTCCTCTTAACAAATATGATAGGACCACCTTTTACGTTCCTGATCCTGCTATTGGTTATACAGACTATCCATTTCTTGATTTTAAACCTTAAAAGATCATTTTTCTGTTAAAAATATTACTATATCGGTTGTAAAGATAAGTTACAACACAATAACTCTTGTTGCAGTATACCTAATGTTAGTTACTTCCTTTTCCTTATTATAAGGGTATAATTCCTATGTACTTTGAATCTAGCATTTATTAAGAAAATGCGCCTTTATTTGTTGTTCTTTTTATGGTACGCACATCTATTATTTAATAGAAATATTTTGTTGTTGGCTAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Sequences View:[Contig3850](Singleton Sequence)

Contig3850 1442  bases 
ATAAATGCATGGTATTCGGCCATTACGGCCGGGGAGAACAGAGAGTACGATTTCTTTGTTCTGTGGTTTTGGGAGGGAATGGCTCCAGCGCCTCTCTTCACTCGCTACAAAATGGGATCTTTCGATCTTTCCCATAGAGTAGTGCTGGCACCACTGACGAGGCAGAGGTCCTTTGGCAATATCCCTCAACCCCATGCGATCTTATATTACTCTCAGAGAGCCTCCCAAGGCGGTCTTCTAATAGCTGAAGCCACCGGAATTTCAGATACTGCCCAAGGGTATGCATCCACACCTGGAATATGGTCCAAAGAGCAGGTGGAAGCATGGAAACCCATCGTAGATGCAGTTCACGAAAAGGGTGGTATCTTCTTTTGTCAAATTTGGCATGTCGGGAGGGTTTCAAATTATGATTTTCAACCTAATGGGCAGGCTCCAATCTCATCTACTGATAAACCACTAAAGCCTGTAGTCCGAGCCAATGGTATTGATGTTTCAACTTTCTCTCCTCCTCGGCGCTTGTCAACAGGAGAAATCCCAGGTGTTGTCAATGATTTCAGGAAAGCAGCAAGGAATGCCATTGAAGCTGGCTTTGATGGAGTTGAGATCCACGGAGCTCATGGATATTTAATCGACCAATTTCTGAAGGATCAAGTCAATGATCGAATTGATAAGTATGGTGGCAGCCTCGAGAATCGCTGCCGCTTCGCCCTGGAGGTAGTTGAAGCTGTTGTCAATGAGATCGGTGCCAACAAGGTCGGCATAAGGCTATCTCCATTCGCCGCCTACTCCGAAGCTGGGGATTCAAACCCAGAAGCACTCGGCCTCTACATGGCCAACTCACTTAACAAATATAGGATTCTCTACTGTCATATGGTGGAGCCTAGGATGATTACAGTGGGAGAGAAGATAGAGACTCCCCATTCTCTCTACCCAATGAGGAGAGCATTTAAGGGAACATTTATAGTTGCAGGAGGATATGACAGGGAAGATGGGAATAAGGCCATTGCTAGTAATTATGCAGATCTGGTTGCATACGGTCGGGTGTTCTTGGCTAATCCTGATCTTCCTCGAAGGTTCGAGCTCGATGCTCCTCTTAACAAATATGATAGGACCACCTTTTACGTTCCTGATCCTGCTATTGGTTATACAGACTATCCATTTCTTGATTTTAAACCTTAAAAGATCATTTTTCTGTTAAAAATATTACTATATCGGTTGTAAAGATAAGTTACAACACAATAACTCTTGTTGCAGTATACCTAATGTTAGTTACTTCCTTTTCCTTATTATAAGGGTATAATTCCTATGTACTTTGAATCTAGCATTTATTAAGAAAATGCGCCTTTATTTGTTGTTCTTTTTATGGTACGCACATCTATTATTTAATAGAAATATTTTGTTGTTGGCTAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Contig Annotation:

GenBank	Accession number (Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
ref	NP_001105909.1	12-oxo-phytodienoic acid reductase5	Zea mays	371	620 bits (1598)	e-175	296/360 (82%)	328/360 (91%)	+1

KEGG Pathway	GO
Contig3850[1 Pathway]	Contig3850[6 GoTerm]

Pathway Informations
First-level terms	Second-level terms	KEGG pathway Num	KEGG pathway Name	KEGG pathway Description	contig Name	locusName	project Name
Metabolism	Lipid Metabolism	00592	alpha-Linolenic acid metabolism	[PATH:ath00592]	Contig3850	AT1G76690	FEICP

GO Informations
Locus Name	Go Name	Go Class Descriptions	GO id	Anotations01
AT1G76690	AT1G76690	cellular_component	GO:0005575	unknown cellular components
AT1G76690	AT1G76690	12-oxophytodienoate reductase activity	GO:0016629	other enzyme activity
AT1G76690	AT1G76690	response to wounding	GO:0009611	response to stress
AT1G76690	AT1G76690	cellular_component	GO:0005575	unknown cellular components
AT1G76690	AT1G76690	12-oxophytodienoate reductase activity	GO:0016629	other enzyme activity
AT1G76690	AT1G76690	response to wounding	GO:0009611	response to stress

Gene Network Informations
Gene Network	Interact with..
Contig3850[interact with..]	Not found!