Contig View

Back [Phalaenopsis Transcriptome]

Library Name: Contig Lists:

Contig Information:

Project Name	Query Name	Length of query
FEICP	Contig3844	1078

Contig Map:

(ProjectName=FEICP SequenceName=Contig3844):
EICPM023-C6_pDNR-R:
EICPM023_C06_pDNR-F:

Sequences View:[Contig3844](Contig Seguence)

1078 bases 
CCTAACTTGCCGGGGGAGTCAATCATTTCTCTCTTCTGTGTTCAGGATTTTCCTACTGCCGTTTCCATTTGAGAGAAGAATCAGCTTCGTCTTCTTGCAATTGGACGAAGGAAACGACTGAACAAAGGGGTGATTTTGAACCCCTTCATCGGATTTCTTCTTCTTCGGGTCTCTTTCCTCGATGGCGGATCAGGCATCTCAAATTGACGGACAAGATGGGGACAAGAACATGCAAAGCTTGGATAATCCGCAAAAGCCAAATATATCAGTGACGGTGTCAAACCCCGTCGATACCGATGGGAGTCCCGCTGCAACTCATGGAAGCATACCACAATCTGTTGACTCATTGCTTCAACTCGAGCTCAAGGACAAAGTCTCAAAGTCGAAGGACAACCAGCCTCGAAAGGCCACTGCCTCCCCTCAACGGAGGACGGTGAGAACTAGCCTCGGAAACGAACACAGTGCCGAGCACTCTCCTTTCCACCACCATCATCAGGCACGAGTTTTGGACAAGGGTGGTAGCTTTGTGCCTTCTTGGGAAAGGAAGGTCTCTTCGGCATCGAACACTCCCGGAAGGTCCAGACTCAAAGCCAGCAGTCGAGCTGATGAATCCCCCGAGGAAGGCGCGGCGGTGCCGAAATTCGGCGAATGGGATGAGGACAATCCTTCCTCAGCTGATGGCTTTACAGGAATTTTCAACAAAGTGAGGGAGGAGAAGCAGACTAGTGCAACAAAAGTTCCAATGCTCACTGATGACTCTGTCTACGTCAATAATTTTCACCATCAGAAGGGAAGCAAGAGGTCTACAATTTGGTGCTGCTTCAAGGGGGGAAAGAAGTGAGGTGATAAGGATGCTTAAGAGGACTGTAAAAGGCTTTTATCTGCTTGTAAATAGCATCAGGGAAGACTGCTTGTGAAGGTGTTTTTATGTATTTAGAAATTCATTCTTTTACTCTCTGCTTCATGCTAAAAAACTGCTACTTTATTCTTAATTTGTTTCTGCTAAAATTAATTCATCCAATTATTGGAAGAGATTATAAGTGATTATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Sequences View:[Contig3844](Singleton Sequence)

Contig3844 1078  bases 
CCTAACTTGCCGGGGGAGTCAATCATTTCTCTCTTCTGTGTTCAGGATTTTCCTACTGCCGTTTCCATTTGAGAGAAGAATCAGCTTCGTCTTCTTGCAATTGGACGAAGGAAACGACTGAACAAAGGGGTGATTTTGAACCCCTTCATCGGATTTCTTCTTCTTCGGGTCTCTTTCCTCGATGGCGGATCAGGCATCTCAAATTGACGGACAAGATGGGGACAAGAACATGCAAAGCTTGGATAATCCGCAAAAGCCAAATATATCAGTGACGGTGTCAAACCCCGTCGATACCGATGGGAGTCCCGCTGCAACTCATGGAAGCATACCACAATCTGTTGACTCATTGCTTCAACTCGAGCTCAAGGACAAAGTCTCAAAGTCGAAGGACAACCAGCCTCGAAAGGCCACTGCCTCCCCTCAACGGAGGACGGTGAGAACTAGCCTCGGAAACGAACACAGTGCCGAGCACTCTCCTTTCCACCACCATCATCAGGCACGAGTTTTGGACAAGGGTGGTAGCTTTGTGCCTTCTTGGGAAAGGAAGGTCTCTTCGGCATCGAACACTCCCGGAAGGTCCAGACTCAAAGCCAGCAGTCGAGCTGATGAATCCCCCGAGGAAGGCGCGGCGGTGCCGAAATTCGGCGAATGGGATGAGGACAATCCTTCCTCAGCTGATGGCTTTACAGGAATTTTCAACAAAGTGAGGGAGGAGAAGCAGACTAGTGCAACAAAAGTTCCAATGCTCACTGATGACTCTGTCTACGTCAATAATTTTCACCATCAGAAGGGAAGCAAGAGGTCTACAATTTGGTGCTGCTTCAAGGGGGGAAAGAAGTGAGGTGATAAGGATGCTTAAGAGGACTGTAAAAGGCTTTTATCTGCTTGTAAATAGCATCAGGGAAGACTGCTTGTGAAGGTGTTTTTATGTATTTAGAAATTCATTCTTTTACTCTCTGCTTCATGCTAAAAAACTGCTACTTTATTCTTAATTTGTTTCTGCTAAAATTAATTCATCCAATTATTGGAAGAGATTATAAGTGATTATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Contig Annotation:

GenBank	Accession number (Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
ref	XP_002265336.1	PREDICTED: hypothetical protein	Vitis vinifera	261	119 bits (299)	4e-25	89/238 (37%)	121/238 (50%), Gaps = 33/238 (13%)	+2

KEGG Pathway	GO
Contig3844[1 Pathway]	Contig3844[19 GoTerm]

Pathway Informations
First-level terms	Second-level terms	KEGG pathway Num	KEGG pathway Name	KEGG pathway Description	contig Name	locusName	project Name
Organismal Systems	Environmental Adaptation	04626	Plant-pathogen interaction	[PATH:ath04626]	Contig3844	AT3G25070	FEICP

GO Informations
Locus Name	Go Name	Go Class Descriptions	GO id	Anotations01
AT3G25070	AT3G25070	plasma membrane	GO:0005886	plasma membrane
AT3G25070	AT3G25070	plasma membrane	GO:0005886	plasma membrane
AT3G25070	AT3G25070	membrane	GO:0016020	other membranes
AT3G25070	AT3G25070	membrane	GO:0016020	other membranes
AT3G25070	AT3G25070	plasma membrane	GO:0005886	plasma membrane
AT3G25070	AT3G25070	protein binding	GO:0005515	protein binding
AT3G25070	AT3G25070	protein binding	GO:0005515	protein binding
AT3G25070	AT3G25070	protein binding	GO:0005515	protein binding
AT3G25070	AT3G25070	plant-type hypersensitive response	GO:0009626	response to stress
AT3G25070	AT3G25070	plant-type hypersensitive response	GO:0009626	other cellular processes
AT3G25070	AT3G25070	protein phosphorylation	GO:0006468	protein metabolism
AT3G25070	AT3G25070	protein phosphorylation	GO:0006468	other cellular processes
AT3G25070	AT3G25070	protein phosphorylation	GO:0006468	other metabolic processes
AT3G25070	AT3G25070	"defense response to bacterium, incompatible interaction"	GO:0009816	response to stress
AT3G25070	AT3G25070	"defense response to bacterium, incompatible interaction"	GO:0009816	response to abiotic or biotic stimulus
AT3G25070	AT3G25070	"defense response signaling pathway, resistance gene-independent"	GO:0010204	response to stress
AT3G25070	AT3G25070	response to molecule of bacterial origin	GO:0002237	response to abiotic or biotic stimulus
AT3G25070	AT3G25070	negative regulation of plant-type hypersensitive response	GO:0034051	response to stress
AT3G25070	AT3G25070	negative regulation of plant-type hypersensitive response	GO:0034051	other cellular processes

Gene Network Informations
Gene Network	Interact with..
Contig3844[interact with..]	Not found!