Contig View

Back [Phalaenopsis Transcriptome]

Library Name: Contig Lists:

Contig Information:

Project Name	Query Name	Length of query
FEICP	Contig3698	1115

Contig Map:

(ProjectName=FEICP SequenceName=Contig3698):
EICPM020-A7_pDNR-R:
EICPM020_A07_pDNR-F:

Sequences View:[Contig3698](Contig Seguence)

1115 bases 
TATTTTAACGGCCGGGGGAAGTGCCTGGAGAAATGTTCTCCCTTGCCATGGAAGCAAAAAGAAGGGGAATGGGAGTTGTGGGATCTACCCAGAATATTTTAGATTTCATCACACGAAGGGTACAAGATGCTTTGGACAGTGATCTTGACAATCATCTTCAGTTTGTTTTAGGAACGGAATCGGGAATGATAACAGCCATTGTTGCTGCAGTACGTAAATTACTTAATTCTAGGAAATCTTCTTCAGGAAGCTCAAAAATCACTGTAGAGATTGTGTTCCCAGTCTCGCCTGATTCAATGACCAGAACGTCATCAAATGGTTGCCATGGACTAAGTTCAGTTTCAGCAGATGATCTTGCAAAGCTTACATTTATTCCTGGAGTGGCAGCTGGCGAGGGATGTTCTTTCCATGGTGGCTGTGCTTCCTGTCCGTATATGAAGATGAACTCTCTTGAAGCTCTGCTGCAGGTTTGCCACCAACTTCCTGAAAGAAATTATAGTCTTTTGGCTTATCGAACAAGAAGAATCAATTCTACTACTCCACTTGGACGATCCATTGCCAAGGTTGGATGCGAACCAATCTTGCATATGAGGCATTTTCAGGCCACGGGAAGATTGTCTGAGAAGCTTGTTTGTCAGATTCTTGGTCAGTCTATTGAGGAGGCCGTAGCTTCGTGATAGTTACTTCTGCAGAAGATAACATTTCAATCACTGACTTGGCCAATACACACCCCACGGAAGACAGCACAAATTTAAAGAGGTTGATTTCGTGAGATATTTGCCAAATCAATTATTATTGTTCCTTCCATTGTTGCAGAAGCTTGCCTTTCATTTTTTGTCATTGAACCGTTTTCCATATTTCTTAGTTTGAGTGTTGGTCTGTTTAATCATAAGATTTGACTAGTGTCAAAATTGTTTCATCGAAGATAGGAAAAGGTAGAAAGGTTTATATACATGTAAAATAATGATGTCAAAATTGCTTCATCAAATATAGGAAGGCATATAAAGGTTTATATATATATATGCATGTAAAATATTGGATGTGAGGCCTATTGTAAGATTAATAAACTTGCGGACCACATGCATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Sequences View:[Contig3698](Singleton Sequence)

Contig3698 1115  bases 
TATTTTAACGGCCGGGGGAAGTGCCTGGAGAAATGTTCTCCCTTGCCATGGAAGCAAAAAGAAGGGGAATGGGAGTTGTGGGATCTACCCAGAATATTTTAGATTTCATCACACGAAGGGTACAAGATGCTTTGGACAGTGATCTTGACAATCATCTTCAGTTTGTTTTAGGAACGGAATCGGGAATGATAACAGCCATTGTTGCTGCAGTACGTAAATTACTTAATTCTAGGAAATCTTCTTCAGGAAGCTCAAAAATCACTGTAGAGATTGTGTTCCCAGTCTCGCCTGATTCAATGACCAGAACGTCATCAAATGGTTGCCATGGACTAAGTTCAGTTTCAGCAGATGATCTTGCAAAGCTTACATTTATTCCTGGAGTGGCAGCTGGCGAGGGATGTTCTTTCCATGGTGGCTGTGCTTCCTGTCCGTATATGAAGATGAACTCTCTTGAAGCTCTGCTGCAGGTTTGCCACCAACTTCCTGAAAGAAATTATAGTCTTTTGGCTTATCGAACAAGAAGAATCAATTCTACTACTCCACTTGGACGATCCATTGCCAAGGTTGGATGCGAACCAATCTTGCATATGAGGCATTTTCAGGCCACGGGAAGATTGTCTGAGAAGCTTGTTTGTCAGATTCTTGGTCAGTCTATTGAGGAGGCCGTAGCTTCGTGATAGTTACTTCTGCAGAAGATAACATTTCAATCACTGACTTGGCCAATACACACCCCACGGAAGACAGCACAAATTTAAAGAGGTTGATTTCGTGAGATATTTGCCAAATCAATTATTATTGTTCCTTCCATTGTTGCAGAAGCTTGCCTTTCATTTTTTGTCATTGAACCGTTTTCCATATTTCTTAGTTTGAGTGTTGGTCTGTTTAATCATAAGATTTGACTAGTGTCAAAATTGTTTCATCGAAGATAGGAAAAGGTAGAAAGGTTTATATACATGTAAAATAATGATGTCAAAATTGCTTCATCAAATATAGGAAGGCATATAAAGGTTTATATATATATATGCATGTAAAATATTGGATGTGAGGCCTATTGTAAGATTAATAAACTTGCGGACCACATGCATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Contig Annotation:

GenBank	Accession number (Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
gb	ABG21972.1	expressed protein	Oryza sativa (japonica cultivar-group)	376	277 bits (709)	1e-72	135/209 (64%)	166/209 (79%)	+3

KEGG Pathway	GO
Contig3698[1 Pathway]	Contig3698[32 GoTerm]

Pathway Informations
First-level terms	Second-level terms	KEGG pathway Num	KEGG pathway Name	KEGG pathway Description	contig Name	locusName	project Name
Metabolism	Metabo lism of Cofactors and Vitamins	00760	Nicotinate and nicotinamide metabolism	[PATH:ath00760]	Contig3698	AT5G50210	FEICP

GO Informations
Locus Name	Go Name	Go Class Descriptions	GO id	Anotations01
AT5G50210	AT5G50210	chloroplast	GO:0009507	chloroplast
AT5G50210	AT5G50210	enzyme activator activity	GO:0008047	other molecular functions
AT5G50210	AT5G50210	quinolinate synthetase A activity	GO:0008987	other enzyme activity
AT5G50210	AT5G50210	quinolinate synthetase A activity	GO:0008987	other enzyme activity
AT5G50210	AT5G50210	aerobic respiration	GO:0009060	electron transport or energy pathways
AT5G50210	AT5G50210	iron-sulfur cluster assembly	GO:0016226	other cellular processes
AT5G50210	AT5G50210	iron-sulfur cluster assembly	GO:0016226	other metabolic processes
AT5G50210	AT5G50210	NAD biosynthetic process	GO:0009435	other cellular processes
AT5G50210	AT5G50210	NAD biosynthetic process	GO:0009435	other metabolic processes
AT5G50210	AT5G50210	NAD biosynthetic process	GO:0009435	other cellular processes
AT5G50210	AT5G50210	NAD biosynthetic process	GO:0009435	other metabolic processes
AT5G50210	AT5G50210	protein homodimerization activity	GO:0042803	protein binding
AT5G50210	AT5G50210	positive regulation of sulfur metabolic process	GO:0051176	other cellular processes
AT5G50210	AT5G50210	positive regulation of sulfur metabolic process	GO:0051176	other metabolic processes
AT5G50210	AT5G50210	positive regulation of transferase activity	GO:0051347	other biological processes
AT5G50210	AT5G50210	"4 iron, 4 sulfur cluster binding"	GO:0051539	other binding
AT5G50210	AT5G50210	chloroplast	GO:0009507	chloroplast
AT5G50210	AT5G50210	enzyme activator activity	GO:0008047	other molecular functions
AT5G50210	AT5G50210	quinolinate synthetase A activity	GO:0008987	other enzyme activity
AT5G50210	AT5G50210	quinolinate synthetase A activity	GO:0008987	other enzyme activity
AT5G50210	AT5G50210	aerobic respiration	GO:0009060	electron transport or energy pathways
AT5G50210	AT5G50210	iron-sulfur cluster assembly	GO:0016226	other cellular processes
AT5G50210	AT5G50210	iron-sulfur cluster assembly	GO:0016226	other metabolic processes
AT5G50210	AT5G50210	NAD biosynthetic process	GO:0009435	other cellular processes
AT5G50210	AT5G50210	NAD biosynthetic process	GO:0009435	other metabolic processes
AT5G50210	AT5G50210	NAD biosynthetic process	GO:0009435	other cellular processes
AT5G50210	AT5G50210	NAD biosynthetic process	GO:0009435	other metabolic processes
AT5G50210	AT5G50210	protein homodimerization activity	GO:0042803	protein binding
AT5G50210	AT5G50210	positive regulation of sulfur metabolic process	GO:0051176	other cellular processes
AT5G50210	AT5G50210	positive regulation of sulfur metabolic process	GO:0051176	other metabolic processes
AT5G50210	AT5G50210	positive regulation of transferase activity	GO:0051347	other biological processes
AT5G50210	AT5G50210	"4 iron, 4 sulfur cluster binding"	GO:0051539	other binding

Gene Network Informations
Gene Network	Interact with..
Contig3698[interact with..]	Not found!