Contig View

Back [Phalaenopsis Transcriptome]

Library Name: Contig Lists:

Contig Information:

Project Name	Query Name	Length of query
FEICP	Contig3108	1233

Contig Map:

(ProjectName=FEICP SequenceName=Contig3108):
EICPM011_C10_pDNR-R:
EICPM047_D01_pDNR-F:

Sequences View:[Contig3108](Contig Seguence)

1233 bases 
GCAACTCCAATCTGAAATTAGGGTTTGTTTCTTTCGATGGAAGGAGAAGGGGGAACATTTCTTCACCCCGATGCAGCGTCTCCTCTTCCCGACCATCCTTCCAACCTAGGTTTATACAGCATAAAAAAGAGGCATTTTGGTTTTATAGGTTTCTCTCTATAGTCTATGATCACGTCATAAACCCTGGGCATTGGACTGAAGACATGAGGGATGAGGCCCTTGAGCCTGCAGATCTCTATGATTCCAGGATGAAGGTTGTGGATGTTGGAGGGGGAACTGGATTTACTACACTGGGAATTATTAAGCATATAAATCCAAAGAATGTCACCATTCTTGACCAGTCGCCACACCAGCTTGCCAAGGCCAGGCAAAAGGGAGCTTTGAAAGAGTGCACCATCATTGAAGGTGATGCAGAGGACTTGCCATTCCCGACGGACTCTGTTGATCGATATGTTTCTGCCGGAAGCATTGAGTACTGGCCAGATCCACAGCGTGGAATTGTGGAGGCATACCGTGTTCTAAAACTTGGAGGAGTAGCCTGCATAATTGGTCCTGTACACCCAACCTTTTGGCTTTCTCGCTTCTTTGCTGATATGTGGATGCTCTTCCCTAAGGAAGAAGAATATATTGAATGGTTTAAGAAAGCTGGGTTTAAAGATGTGAAGCTTAAAAGAATAGGTCCAAAATGGTATCGTGGTGTGAGACGCCATGGACTCATTATGGGATGCTCTGTCACCGGAGTTAAAAGAGAATCCGGTGAATCTCCTCTCAAGCTTGGTCCTAAGGTTGAGGCTGTGGAGAAATCTGTGAATCCATTTGCCTTTCTGGTTCGTTTCATTTTGGGTTCCATTGCTGCTGCTTACTACGTGCTGGTGCCTGTTTACATGTGGATTAAAGACCAGATAGTTCCAAAGGGAAAGCCAATTTGAATATGAAGAAGGCCATGATGATGATGTGAAAAAGGTGGGGAGAGAGAGACAGAGAGAGATGATGAACTATATTATCTGGTGTGAAGGATTGCATTAAACTAAAGAACTTTTGGTTGTACTTCTCCTAGCTATGCATTGTTAGATAACATTTGTATTTATAGACTTTCGCGCGCTTTGGATTTTAGCTCCATTTAATGTAATAATCTTTTGATGTTCTAATTTTTGAATTCATATCTATTCTCCTATTATTGAATGAGACATGTTCTCGATATCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Sequences View:[Contig3108](Singleton Sequence)

Contig3108 1233  bases 
GCAACTCCAATCTGAAATTAGGGTTTGTTTCTTTCGATGGAAGGAGAAGGGGGAACATTTCTTCACCCCGATGCAGCGTCTCCTCTTCCCGACCATCCTTCCAACCTAGGTTTATACAGCATAAAAAAGAGGCATTTTGGTTTTATAGGTTTCTCTCTATAGTCTATGATCACGTCATAAACCCTGGGCATTGGACTGAAGACATGAGGGATGAGGCCCTTGAGCCTGCAGATCTCTATGATTCCAGGATGAAGGTTGTGGATGTTGGAGGGGGAACTGGATTTACTACACTGGGAATTATTAAGCATATAAATCCAAAGAATGTCACCATTCTTGACCAGTCGCCACACCAGCTTGCCAAGGCCAGGCAAAAGGGAGCTTTGAAAGAGTGCACCATCATTGAAGGTGATGCAGAGGACTTGCCATTCCCGACGGACTCTGTTGATCGATATGTTTCTGCCGGAAGCATTGAGTACTGGCCAGATCCACAGCGTGGAATTGTGGAGGCATACCGTGTTCTAAAACTTGGAGGAGTAGCCTGCATAATTGGTCCTGTACACCCAACCTTTTGGCTTTCTCGCTTCTTTGCTGATATGTGGATGCTCTTCCCTAAGGAAGAAGAATATATTGAATGGTTTAAGAAAGCTGGGTTTAAAGATGTGAAGCTTAAAAGAATAGGTCCAAAATGGTATCGTGGTGTGAGACGCCATGGACTCATTATGGGATGCTCTGTCACCGGAGTTAAAAGAGAATCCGGTGAATCTCCTCTCAAGCTTGGTCCTAAGGTTGAGGCTGTGGAGAAATCTGTGAATCCATTTGCCTTTCTGGTTCGTTTCATTTTGGGTTCCATTGCTGCTGCTTACTACGTGCTGGTGCCTGTTTACATGTGGATTAAAGACCAGATAGTTCCAAAGGGAAAGCCAATTTGAATATGAAGAAGGCCATGATGATGATGTGAAAAAGGTGGGGAGAGAGAGACAGAGAGAGATGATGAACTATATTATCTGGTGTGAAGGATTGCATTAAACTAAAGAACTTTTGGTTGTACTTCTCCTAGCTATGCATTGTTAGATAACATTTGTATTTATAGACTTTCGCGCGCTTTGGATTTTAGCTCCATTTAATGTAATAATCTTTTGATGTTCTAATTTTTGAATTCATATCTATTCTCCTATTATTGAATGAGACATGTTCTCGATATCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Contig Annotation:

GenBank	Accession number (Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
ref	XP_002312559.1	predicted protein	Populus trichocarpa	341	482 bits (1241)	e-134	225/272 (82%)	243/272 (89%)	+3

KEGG Pathway	GO
Contig3108[1 Pathway]	Contig3108[90 GoTerm]

Pathway Informations
First-level terms	Second-level terms	KEGG pathway Num	KEGG pathway Name	KEGG pathway Description	contig Name	locusName	project Name
Metabolism	Metabo lism of Cofactors and Vitamins	00130	Ubiquinone and other terpenoid-quinone biosynthesis	[PATH:ath00130]	Contig3108	AT3G63410	FEICP

GO Informations
Locus Name	Go Name	Go Class Descriptions	GO id	Anotations01
AT3G63410	AT3G63410	chloroplast	GO:0009507	chloroplast
AT3G63410	AT3G63410	chloroplast	GO:0009507	chloroplast
AT3G63410	AT3G63410	chloroplast envelope	GO:0009941	plastid
AT3G63410	AT3G63410	chloroplast envelope	GO:0009941	plastid
AT3G63410	AT3G63410	chloroplast envelope	GO:0009941	chloroplast
AT3G63410	AT3G63410	chloroplast envelope	GO:0009941	chloroplast
AT3G63410	AT3G63410	chloroplast envelope	GO:0009941	other cytoplasmic components
AT3G63410	AT3G63410	chloroplast envelope	GO:0009941	other cytoplasmic components
AT3G63410	AT3G63410	chloroplast envelope	GO:0009941	other intracellular components
AT3G63410	AT3G63410	chloroplast envelope	GO:0009941	other intracellular components
AT3G63410	AT3G63410	chloroplast	GO:0009507	chloroplast
AT3G63410	AT3G63410	S-adenosylmethionine-dependent methyltransferase activity	GO:0008757	transferase activity
AT3G63410	AT3G63410	methyltransferase activity	GO:0008168	transferase activity
AT3G63410	AT3G63410	chloroplast inner membrane	GO:0009706	plastid
AT3G63410	AT3G63410	chloroplast inner membrane	GO:0009706	chloroplast
AT3G63410	AT3G63410	chloroplast inner membrane	GO:0009706	other membranes
AT3G63410	AT3G63410	chloroplast inner membrane	GO:0009706	other cytoplasmic components
AT3G63410	AT3G63410	chloroplast inner membrane	GO:0009706	other intracellular components
AT3G63410	AT3G63410	chloroplast inner membrane	GO:0009706	plastid
AT3G63410	AT3G63410	chloroplast inner membrane	GO:0009706	chloroplast
AT3G63410	AT3G63410	chloroplast inner membrane	GO:0009706	other membranes
AT3G63410	AT3G63410	chloroplast inner membrane	GO:0009706	other cytoplasmic components
AT3G63410	AT3G63410	chloroplast inner membrane	GO:0009706	other intracellular components
AT3G63410	AT3G63410	vitamin E biosynthetic process	GO:0010189	other cellular processes
AT3G63410	AT3G63410	vitamin E biosynthetic process	GO:0010189	other metabolic processes
AT3G63410	AT3G63410	plastoquinone biosynthetic process	GO:0010236	other cellular processes
AT3G63410	AT3G63410	plastoquinone biosynthetic process	GO:0010236	other cellular processes
AT3G63410	AT3G63410	plastoquinone biosynthetic process	GO:0010236	other metabolic processes
AT3G63410	AT3G63410	plastoquinone biosynthetic process	GO:0010236	other metabolic processes
AT3G63410	AT3G63410	"2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity"	GO:0051741	transferase activity
AT3G63410	AT3G63410	chloroplast	GO:0009507	chloroplast
AT3G63410	AT3G63410	chloroplast	GO:0009507	chloroplast
AT3G63410	AT3G63410	chloroplast envelope	GO:0009941	plastid
AT3G63410	AT3G63410	chloroplast envelope	GO:0009941	plastid
AT3G63410	AT3G63410	chloroplast envelope	GO:0009941	chloroplast
AT3G63410	AT3G63410	chloroplast envelope	GO:0009941	chloroplast
AT3G63410	AT3G63410	chloroplast envelope	GO:0009941	other cytoplasmic components
AT3G63410	AT3G63410	chloroplast envelope	GO:0009941	other cytoplasmic components
AT3G63410	AT3G63410	chloroplast envelope	GO:0009941	other intracellular components
AT3G63410	AT3G63410	chloroplast envelope	GO:0009941	other intracellular components
AT3G63410	AT3G63410	chloroplast	GO:0009507	chloroplast
AT3G63410	AT3G63410	S-adenosylmethionine-dependent methyltransferase activity	GO:0008757	transferase activity
AT3G63410	AT3G63410	methyltransferase activity	GO:0008168	transferase activity
AT3G63410	AT3G63410	chloroplast inner membrane	GO:0009706	plastid
AT3G63410	AT3G63410	chloroplast inner membrane	GO:0009706	chloroplast
AT3G63410	AT3G63410	chloroplast inner membrane	GO:0009706	other membranes
AT3G63410	AT3G63410	chloroplast inner membrane	GO:0009706	other cytoplasmic components
AT3G63410	AT3G63410	chloroplast inner membrane	GO:0009706	other intracellular components
AT3G63410	AT3G63410	chloroplast inner membrane	GO:0009706	plastid
AT3G63410	AT3G63410	chloroplast inner membrane	GO:0009706	chloroplast
AT3G63410	AT3G63410	chloroplast inner membrane	GO:0009706	other membranes
AT3G63410	AT3G63410	chloroplast inner membrane	GO:0009706	other cytoplasmic components
AT3G63410	AT3G63410	chloroplast inner membrane	GO:0009706	other intracellular components
AT3G63410	AT3G63410	vitamin E biosynthetic process	GO:0010189	other cellular processes
AT3G63410	AT3G63410	vitamin E biosynthetic process	GO:0010189	other metabolic processes
AT3G63410	AT3G63410	plastoquinone biosynthetic process	GO:0010236	other cellular processes
AT3G63410	AT3G63410	plastoquinone biosynthetic process	GO:0010236	other cellular processes
AT3G63410	AT3G63410	plastoquinone biosynthetic process	GO:0010236	other metabolic processes
AT3G63410	AT3G63410	plastoquinone biosynthetic process	GO:0010236	other metabolic processes
AT3G63410	AT3G63410	"2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity"	GO:0051741	transferase activity
AT3G63410	AT3G63410	chloroplast	GO:0009507	chloroplast
AT3G63410	AT3G63410	chloroplast	GO:0009507	chloroplast
AT3G63410	AT3G63410	chloroplast envelope	GO:0009941	plastid
AT3G63410	AT3G63410	chloroplast envelope	GO:0009941	plastid
AT3G63410	AT3G63410	chloroplast envelope	GO:0009941	chloroplast
AT3G63410	AT3G63410	chloroplast envelope	GO:0009941	chloroplast
AT3G63410	AT3G63410	chloroplast envelope	GO:0009941	other cytoplasmic components
AT3G63410	AT3G63410	chloroplast envelope	GO:0009941	other cytoplasmic components
AT3G63410	AT3G63410	chloroplast envelope	GO:0009941	other intracellular components
AT3G63410	AT3G63410	chloroplast envelope	GO:0009941	other intracellular components
AT3G63410	AT3G63410	chloroplast	GO:0009507	chloroplast
AT3G63410	AT3G63410	S-adenosylmethionine-dependent methyltransferase activity	GO:0008757	transferase activity
AT3G63410	AT3G63410	methyltransferase activity	GO:0008168	transferase activity
AT3G63410	AT3G63410	chloroplast inner membrane	GO:0009706	plastid
AT3G63410	AT3G63410	chloroplast inner membrane	GO:0009706	chloroplast
AT3G63410	AT3G63410	chloroplast inner membrane	GO:0009706	other membranes
AT3G63410	AT3G63410	chloroplast inner membrane	GO:0009706	other cytoplasmic components
AT3G63410	AT3G63410	chloroplast inner membrane	GO:0009706	other intracellular components
AT3G63410	AT3G63410	chloroplast inner membrane	GO:0009706	plastid
AT3G63410	AT3G63410	chloroplast inner membrane	GO:0009706	chloroplast
AT3G63410	AT3G63410	chloroplast inner membrane	GO:0009706	other membranes
AT3G63410	AT3G63410	chloroplast inner membrane	GO:0009706	other cytoplasmic components
AT3G63410	AT3G63410	chloroplast inner membrane	GO:0009706	other intracellular components
AT3G63410	AT3G63410	vitamin E biosynthetic process	GO:0010189	other cellular processes
AT3G63410	AT3G63410	vitamin E biosynthetic process	GO:0010189	other metabolic processes
AT3G63410	AT3G63410	plastoquinone biosynthetic process	GO:0010236	other cellular processes
AT3G63410	AT3G63410	plastoquinone biosynthetic process	GO:0010236	other cellular processes
AT3G63410	AT3G63410	plastoquinone biosynthetic process	GO:0010236	other metabolic processes
AT3G63410	AT3G63410	plastoquinone biosynthetic process	GO:0010236	other metabolic processes
AT3G63410	AT3G63410	"2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity"	GO:0051741	transferase activity

Gene Network Informations
Gene Network	Interact with..
Contig3108[interact with..]	Not found!