Contig View

Back [Phalaenopsis Transcriptome]

Library Name: Contig Lists:

Contig Information:

Project Name	Query Name	Length of query
FEICP	Contig2990	1127

Contig Map:

(ProjectName=FEICP SequenceName=Contig2990):
EICPM032_C07_pDNR-F:
EICPM056_F09_pDNR-F:
EICPM032-C07_pDNR-R:

Sequences View:[Contig2990](Contig Seguence)

1127 bases 
CCCCCCTTCTTATTTTTATCGATTCATTAGCAGGGATTCGGCCATTACGGCCGGGGGTGACACAACCTTTGAAGTTCGTCCGAAATCAATGGTGTTTGGATTATGTCCAATGCCCGGCGACGCAGTGACCTGGCGAACTCTCTCTACTCAAAATTAGGGCTGAATCGCGCCTCTGTGCTCTCCGCCCCTCCTCCTCTCTCTCTTTCGGGCCTTGCACGAATTTTTTGATATCTTCTCCTTCGTTCTCTTCAACGGTTTATTACTTCGGCAATCAAAATGAGCACTACTCCTCTCTCCACCGCCCACTCATTCCAGACCAGAATAAAAGCTCCATTTTTATCCTCCATGTTGGTGAGAAGCCCAGCTTCCCTTTCCTTCACCAAATCCATTTCAAAAACATCCAGTCTCAAGACTGAATCAAACTGCTTCAAGGCCGCCGCCATGGCAGCCTACAAGGTCAAGCTCATCGGTCCAGACGGCAATGAGGACGAGTTCGAAGCCCCCGACGATGCTTACATTCTGGACTCCGCCGAGAACGCCGGAATCGACCTCCCTTACTCCTGCAAAGCTGGAGCTTGTTCCACCTGCGCCGGTCTCTTGGTTTCCGGCAATGTCGACCAGTCTGATGGATCCTTTCTCGACGAATCTCAGATGGCCGACGGATACGTCCTGACCTGCATCTCGTATCCGAAATCCGATTGCATCATCCATACTCATAAGGAAGGGGAGCTTTACTGAATGATCTGAAAATTTTAGATTTAATAAAAGGAAGACTTGCATGCATGCCACCTTATTCATACACATTTACATGTCGAACGCTTGAAAGTTTTAATTTTTACATGTATGCCGCCCTGCCTATGCATGAAAAGATGTGTTTCACGAAATAGTGATATTTTTGACGTGATATGAAAGATTTGGGTGGTGTGAAATGTAAAAGGTGAATGTTTTGCGGTTAGATATGTAAATACATAAGAATGGGTGGCAGTATGCGTCCATGTTTGGGTGGGTTCTATGAGCTTAGTTGATGCAATCAGGGCTGTTAATGCGTCTGGAATTCATTGGTTTACATTGTGCAGATAAATCTTTATTTGATAATATGATTTGTCTTTCAAAAAAAAAAAAAAAAA

Sequences View:[Contig2990](Singleton Sequence)

Contig2990 1127  bases 
CCCCCCTTCTTATTTTTATCGATTCATTAGCAGGGATTCGGCCATTACGGCCGGGGGTGACACAACCTTTGAAGTTCGTCCGAAATCAATGGTGTTTGGATTATGTCCAATGCCCGGCGACGCAGTGACCTGGCGAACTCTCTCTACTCAAAATTAGGGCTGAATCGCGCCTCTGTGCTCTCCGCCCCTCCTCCTCTCTCTCTTTCGGGCCTTGCACGAATTTTTTGATATCTTCTCCTTCGTTCTCTTCAACGGTTTATTACTTCGGCAATCAAAATGAGCACTACTCCTCTCTCCACCGCCCACTCATTCCAGACCAGAATAAAAGCTCCATTTTTATCCTCCATGTTGGTGAGAAGCCCAGCTTCCCTTTCCTTCACCAAATCCATTTCAAAAACATCCAGTCTCAAGACTGAATCAAACTGCTTCAAGGCCGCCGCCATGGCAGCCTACAAGGTCAAGCTCATCGGTCCAGACGGCAATGAGGACGAGTTCGAAGCCCCCGACGATGCTTACATTCTGGACTCCGCCGAGAACGCCGGAATCGACCTCCCTTACTCCTGCAAAGCTGGAGCTTGTTCCACCTGCGCCGGTCTCTTGGTTTCCGGCAATGTCGACCAGTCTGATGGATCCTTTCTCGACGAATCTCAGATGGCCGACGGATACGTCCTGACCTGCATCTCGTATCCGAAATCCGATTGCATCATCCATACTCATAAGGAAGGGGAGCTTTACTGAATGATCTGAAAATTTTAGATTTAATAAAAGGAAGACTTGCATGCATGCCACCTTATTCATACACATTTACATGTCGAACGCTTGAAAGTTTTAATTTTTACATGTATGCCGCCCTGCCTATGCATGAAAAGATGTGTTTCACGAAATAGTGATATTTTTGACGTGATATGAAAGATTTGGGTGGTGTGAAATGTAAAAGGTGAATGTTTTGCGGTTAGATATGTAAATACATAAGAATGGGTGGCAGTATGCGTCCATGTTTGGGTGGGTTCTATGAGCTTAGTTGATGCAATCAGGGCTGTTAATGCGTCTGGAATTCATTGGTTTACATTGTGCAGATAAATCTTTATTTGATAATATGATTTGTCTTTCAAAAAAAAAAAAAAAAA

Contig Annotation:

GenBank	Accession number (Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
gb	ABG33769.1	ferredoxin III	Musa acuminata	131	190 bits (483)	2e-46	86/105 (81%)	96/105 (91%)	+1

KEGG Pathway	GO
Contig2990[1 Pathway]	Contig2990[7 GoTerm]

Pathway Informations
First-level terms	Second-level terms	KEGG pathway Num	KEGG pathway Name	KEGG pathway Description	contig Name	locusName	project Name
Metabolism	Energy Metabolism	00195	Photosynthesis	[PATH:ath00195]	Contig2990	AT2G27510	FEICP

GO Informations
Locus Name	Go Name	Go Class Descriptions	GO id	Anotations01
AT2G27510	AT2G27510	chloroplast	GO:0009507	chloroplast
AT2G27510	AT2G27510	electron carrier activity	GO:0009055	other molecular functions
AT2G27510	AT2G27510	iron-sulfur cluster binding	GO:0051536	other binding
AT2G27510	AT2G27510	"2 iron, 2 sulfur cluster binding"	GO:0051537	other binding
AT2G27510	AT2G27510	electron transport chain	GO:0022900	other metabolic processes
AT2G27510	AT2G27510	electron transport chain	GO:0022900	electron transport or energy pathways
AT2G27510	AT2G27510	electron carrier activity	GO:0009055	other molecular functions

Gene Network Informations
Gene Network	Interact with..
Contig2990[interact with..]	Not found!