Contig View

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Library Name: Contig Lists:

Contig Information:

Project Name	Query Name	Length of query
FCTEVCP	FCTEVCPM009_F03_PDNR-F	1068

Contig Map:

(ProjectName=FCTEVCP
SequenceName=NoContigFind):

Sequences View:[NoContigFind](Contig Seguence)

Sequences View:[FCTEVCPM009_F03_PDNR-F](Singleton Sequence)

FCTEVCPM009_F03_PDNR-F 1068  bases 
GGTCCATATTTTGTTGGAATTCTCAGTGCAACCTAAAGGGCCGCTAGGGTTACAGAAGATAACGGAAAAATGTCGGGCCAGGGGCAGAGGCTGACCGTGGTGCCGACGGTGACGATGTTGGGCGTGATGAAGGCGCGGCTGGTCGGTGCGACCCGCGGCCACGCTCTCCTGAAGAAGAAGAGCGACGCCCTCACGGTTCAATTCCGCCAGATCCTTAAGAAAATAGTCTCCACAAAGGAGTCCATGGGGGACATCATGCGATCTTCCTCCTTCGCACTCACGGAGGCCAGGTACGCTGCCGGTGAAAACATTAAACACGTAGTCTTGGAGTCCGTTCGCTCTGCGTCAGTCAAGGTTCGTTCTCGGCAGGAGAACGTTGCAGGTGTGAAGCTCCCTAAGTTTGAACACTTCACTGACTCTGCTGCTGACTCCAAGTCTTCTACTGACCTCACTGGCCTTGCTCGTGGTGGACAGCAGGTCCAGGCCTGCCGTGCCGCACACATCAAGGCAATTGAGGTTCTTGTTGAGCTTGCCTCTCTTCAGACCTCCTTTCTCACACTTGATGAGGCCATCAAGACTACCAACCGAAGGGTCAATGCGCTTGAGAATGTGGTCAAGCCCCGAATTGAGAATACAATCAGCTATATAAAGGGGGAACTTGACGAGCTAGAGAGAGAGGATTTCTTCAGGCTGAAGAAGATCCAGGGATATAAGAAGAGGGAGATAGAAAGGCAAACGCAGTCAGCTAAGCAGTTTGCAGAAGAGAAGCGTGTGGAAGAGATTTCTCTGCAGAAAGGGGATATCTTTCCATTCTGCACATAATATGCTTGTTGCTGGGGCAGAGAAAGATGAGGACATCATTTTTTAATGGATACCAGATGTTTACTTGTTAGGTTGGATCCTGCAGCAGGGCAAAAGTTGCAGCTTGTATTTTACTCTGTCATGATGCCTCGTCTCTGTAATCTGTTGGATTCCTTTCTAGCTGGGTTATGGCATGTAATATTTTATTTTCCAAATCTTCCAGAACCAAACACCACTTCAAATAATTTCATTTATGTATATCGTCAA

Contig Annotation:

GenBank	Accession number (Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
ref	XP_002523036.1	ATP synthase subunit d, putative	Ricinus communis	261	370 bits (951)	e-106	198/243 (81%)	212/243 (87%)	+1

KEGG Pathway	GO
NoContigFind[2 Pathway]	NoContigFind[60 GoTerm]

Pathway Informations
First-level terms	Second-level terms	KEGG pathway Num	KEGG pathway Name	KEGG pathway Description	contig Name	locusName	project Name
Cellular Processes	Transport and Catabolism	04145	Phagosome	[PATH:ath04145]	FCTEVCPM009_F03_PDNR-F	AT3G58730	FCTEVCP
Metabolism	Energy Metabolism	00190	Oxidative phosphorylation	[PATH:ath00190]	FCTEVCPM009_F03_PDNR-F	AT3G58730	FCTEVCP

GO Informations
Locus Name	Go Name	Go Class Descriptions	GO id	Anotations01
AT3G58730	AT3G58730	membrane	GO:0016020	other membranes
AT3G58730	AT3G58730	plasma membrane	GO:0005886	plasma membrane
AT3G58730	AT3G58730	plasma membrane	GO:0005886	plasma membrane
AT3G58730	AT3G58730	vacuole	GO:0005773	other cytoplasmic components
AT3G58730	AT3G58730	vacuole	GO:0005773	other cytoplasmic components
AT3G58730	AT3G58730	vacuole	GO:0005773	other intracellular components
AT3G58730	AT3G58730	vacuole	GO:0005773	other intracellular components
AT3G58730	AT3G58730	ATP synthesis coupled proton transport	GO:0015986	transport
AT3G58730	AT3G58730	ATP synthesis coupled proton transport	GO:0015986	other cellular processes
AT3G58730	AT3G58730	ATP synthesis coupled proton transport	GO:0015986	other metabolic processes
AT3G58730	AT3G58730	ATP synthesis coupled proton transport	GO:0015986	electron transport or energy pathways
AT3G58730	AT3G58730	plant-type vacuole	GO:0000325	other cytoplasmic components
AT3G58730	AT3G58730	plant-type vacuole	GO:0000325	other intracellular components
AT3G58730	AT3G58730	"ATPase activity, coupled to transmembrane movement of substances"	GO:0042626	hydrolase activity
AT3G58730	AT3G58730	"ATPase activity, coupled to transmembrane movement of substances"	GO:0042626	transporter activity
AT3G58730	AT3G58730	"proton-transporting ATPase activity, rotational mechanism"	GO:0046961	hydrolase activity
AT3G58730	AT3G58730	"proton-transporting ATPase activity, rotational mechanism"	GO:0046961	transporter activity
AT3G58730	AT3G58730	vacuolar membrane	GO:0005774	other membranes
AT3G58730	AT3G58730	vacuolar membrane	GO:0005774	other cytoplasmic components
AT3G58730	AT3G58730	vacuolar membrane	GO:0005774	other intracellular components
AT3G58730	AT3G58730	membrane	GO:0016020	other membranes
AT3G58730	AT3G58730	plasma membrane	GO:0005886	plasma membrane
AT3G58730	AT3G58730	plasma membrane	GO:0005886	plasma membrane
AT3G58730	AT3G58730	vacuole	GO:0005773	other cytoplasmic components
AT3G58730	AT3G58730	vacuole	GO:0005773	other cytoplasmic components
AT3G58730	AT3G58730	vacuole	GO:0005773	other intracellular components
AT3G58730	AT3G58730	vacuole	GO:0005773	other intracellular components
AT3G58730	AT3G58730	ATP synthesis coupled proton transport	GO:0015986	transport
AT3G58730	AT3G58730	ATP synthesis coupled proton transport	GO:0015986	other cellular processes
AT3G58730	AT3G58730	ATP synthesis coupled proton transport	GO:0015986	other metabolic processes
AT3G58730	AT3G58730	ATP synthesis coupled proton transport	GO:0015986	electron transport or energy pathways
AT3G58730	AT3G58730	plant-type vacuole	GO:0000325	other cytoplasmic components
AT3G58730	AT3G58730	plant-type vacuole	GO:0000325	other intracellular components
AT3G58730	AT3G58730	"ATPase activity, coupled to transmembrane movement of substances"	GO:0042626	hydrolase activity
AT3G58730	AT3G58730	"ATPase activity, coupled to transmembrane movement of substances"	GO:0042626	transporter activity
AT3G58730	AT3G58730	"proton-transporting ATPase activity, rotational mechanism"	GO:0046961	hydrolase activity
AT3G58730	AT3G58730	"proton-transporting ATPase activity, rotational mechanism"	GO:0046961	transporter activity
AT3G58730	AT3G58730	vacuolar membrane	GO:0005774	other membranes
AT3G58730	AT3G58730	vacuolar membrane	GO:0005774	other cytoplasmic components
AT3G58730	AT3G58730	vacuolar membrane	GO:0005774	other intracellular components
AT3G58730	AT3G58730	membrane	GO:0016020	other membranes
AT3G58730	AT3G58730	plasma membrane	GO:0005886	plasma membrane
AT3G58730	AT3G58730	plasma membrane	GO:0005886	plasma membrane
AT3G58730	AT3G58730	vacuole	GO:0005773	other cytoplasmic components
AT3G58730	AT3G58730	vacuole	GO:0005773	other cytoplasmic components
AT3G58730	AT3G58730	vacuole	GO:0005773	other intracellular components
AT3G58730	AT3G58730	vacuole	GO:0005773	other intracellular components
AT3G58730	AT3G58730	ATP synthesis coupled proton transport	GO:0015986	transport
AT3G58730	AT3G58730	ATP synthesis coupled proton transport	GO:0015986	other cellular processes
AT3G58730	AT3G58730	ATP synthesis coupled proton transport	GO:0015986	other metabolic processes
AT3G58730	AT3G58730	ATP synthesis coupled proton transport	GO:0015986	electron transport or energy pathways
AT3G58730	AT3G58730	plant-type vacuole	GO:0000325	other cytoplasmic components
AT3G58730	AT3G58730	plant-type vacuole	GO:0000325	other intracellular components
AT3G58730	AT3G58730	"ATPase activity, coupled to transmembrane movement of substances"	GO:0042626	hydrolase activity
AT3G58730	AT3G58730	"ATPase activity, coupled to transmembrane movement of substances"	GO:0042626	transporter activity
AT3G58730	AT3G58730	"proton-transporting ATPase activity, rotational mechanism"	GO:0046961	hydrolase activity
AT3G58730	AT3G58730	"proton-transporting ATPase activity, rotational mechanism"	GO:0046961	transporter activity
AT3G58730	AT3G58730	vacuolar membrane	GO:0005774	other membranes
AT3G58730	AT3G58730	vacuolar membrane	GO:0005774	other cytoplasmic components
AT3G58730	AT3G58730	vacuolar membrane	GO:0005774	other intracellular components

Gene Network Informations
Gene Network	Interact with..
FCTEVCPM009_F03_PDNR-F[interact with..]	Contig0491 Contig0888

Query Name	Length of query	GenBank	Accession number(Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
Contig0491	1056	ref	XP_002509910.1	vacuolar ATP synthase subunit E, putative	Ricinus communis	230	282 bits (722)	1e-95	137/181 (75%)	161/181 (88%)	+1
Contig0888	870	gb	AAF73016.1	AF262934_1 ubiquitin conjugating protein	Avicennia marina	152	319 bits (817)	3e-85	150/152 (98%)	152/152 (100%)	+1