Contig View

Back [Phalaenopsis Transcriptome]

Library Name: Contig Lists:

Contig Information:

Project Name	Query Name	Length of query
FCTEVCP	Contig1429	1228

Contig Map:

(ProjectName=FCTEVCP SequenceName=Contig1429):
FCTEVCPM019_E10_PDNR-F:
FCTEVCPM065_A05_PDNR-F:

Sequences View:[Contig1429](Contig Seguence)

1228 bases 
GGTTATTGGGCGAATAGCTTCTTGCAGGATTTGGAGAGGACGTGTCGCGACCACGGTAGGAGGAGGTGTTGGGGTATTGGTTTTGGTTTGGGCTTTAGGGTGATTGCTCTTGATCCCAATTTTAGAAAACTTTCTGTGGAACACATTGTTTCGGCGTATAGAAGGACGAAAAACCGAGGTATCCTTTTGGATTATGATGGAACCATGATGCCTCGAACATCTATCAATAAGAAGCCTACTCCTGAAGCTATAAGCATCCTCAATAGCTTGTGTAGGGATCCAGACAACCTAGTTTTTTTGGTTAGTGGAAAAGACAAGGATACTCTCAGTGATTGGTTTTCACCTTGCAACAAACTTGGTCTTGCTGCAGAGCATGGGTACTTCATGAGGCAAAACCAAGACTCAAACTGGGAGACACGCATCCCCGTTCCGGAATTTGACTGGAAGCAGATTGCTGAACCTGTTATGCAGTTATACACGGAAACAACCGATGGATCGAGCATAGAAGCGAAAGAAAGCGCGCTTGTTTGGCATTATCAATATGCAGACCCTGATTTTGGTTCATGCCAGGCCAAAGAACTTCTAGACCACCTTGAAAGTGTTCTTTCAAATGAGCCTGTTTCTGTCAAAAGTGGCCAACATTTTGTTGAAGTTAAGCCACAGGGTGTCACAAAGGGCTTAGTTGCAGACCACCTTTTGTCGATGATGCGGGAGAAGACTAAACTTCCAGATTTTGTTGTTTGCATTGGTGACGATCGATCGGATGACGACATGTTCGAGGTCATCAATAGTGCAAGGGCAGGGTCTGCTTTGTCTCCCATCGCCGAAGTTTTTGCTTGCACTGTCGGGCAGAAGCCGAGCAAGGCCAAATACTATCTGGAGGATACAACAGAGACTGTAAGGATGCTGCAGGGGCTTGCAATGGCTTCAGATCAAATGGGGCTTGTTTCAGCCTCTCAGGCTCTCAGTATTTTCAAAGGCGACTAATGGATGCAACGGAGATTGTAAGAATGCTGCAGGGTTTCTTTCTTGGTGGGTTTGGGTTCTGATCATTTGTTGTGGTGTATATATTTTTGATGAAAAATTTATATATTTAGCGAGTTTATAGTGGGCTAGTTATATATTTTGTGATTGGGGTTGTGCTATTGTGATGGTAGAATGTAATATTTAGTCTTCTTCATTTAAATTCTGGAGTTTGTTTGGTGACAAAAAAAAAAAAAAAAAAAAA

Sequences View:[Contig1429](Singleton Sequence)

Contig1429 1228  bases 
GGTTATTGGGCGAATAGCTTCTTGCAGGATTTGGAGAGGACGTGTCGCGACCACGGTAGGAGGAGGTGTTGGGGTATTGGTTTTGGTTTGGGCTTTAGGGTGATTGCTCTTGATCCCAATTTTAGAAAACTTTCTGTGGAACACATTGTTTCGGCGTATAGAAGGACGAAAAACCGAGGTATCCTTTTGGATTATGATGGAACCATGATGCCTCGAACATCTATCAATAAGAAGCCTACTCCTGAAGCTATAAGCATCCTCAATAGCTTGTGTAGGGATCCAGACAACCTAGTTTTTTTGGTTAGTGGAAAAGACAAGGATACTCTCAGTGATTGGTTTTCACCTTGCAACAAACTTGGTCTTGCTGCAGAGCATGGGTACTTCATGAGGCAAAACCAAGACTCAAACTGGGAGACACGCATCCCCGTTCCGGAATTTGACTGGAAGCAGATTGCTGAACCTGTTATGCAGTTATACACGGAAACAACCGATGGATCGAGCATAGAAGCGAAAGAAAGCGCGCTTGTTTGGCATTATCAATATGCAGACCCTGATTTTGGTTCATGCCAGGCCAAAGAACTTCTAGACCACCTTGAAAGTGTTCTTTCAAATGAGCCTGTTTCTGTCAAAAGTGGCCAACATTTTGTTGAAGTTAAGCCACAGGGTGTCACAAAGGGCTTAGTTGCAGACCACCTTTTGTCGATGATGCGGGAGAAGACTAAACTTCCAGATTTTGTTGTTTGCATTGGTGACGATCGATCGGATGACGACATGTTCGAGGTCATCAATAGTGCAAGGGCAGGGTCTGCTTTGTCTCCCATCGCCGAAGTTTTTGCTTGCACTGTCGGGCAGAAGCCGAGCAAGGCCAAATACTATCTGGAGGATACAACAGAGACTGTAAGGATGCTGCAGGGGCTTGCAATGGCTTCAGATCAAATGGGGCTTGTTTCAGCCTCTCAGGCTCTCAGTATTTTCAAAGGCGACTAATGGATGCAACGGAGATTGTAAGAATGCTGCAGGGTTTCTTTCTTGGTGGGTTTGGGTTCTGATCATTTGTTGTGGTGTATATATTTTTGATGAAAAATTTATATATTTAGCGAGTTTATAGTGGGCTAGTTATATATTTTGTGATTGGGGTTGTGCTATTGTGATGGTAGAATGTAATATTTAGTCTTCTTCATTTAAATTCTGGAGTTTGTTTGGTGACAAAAAAAAAAAAAAAAAAAAA

Contig Annotation:

GenBank	Accession number (Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
ref	XP_002304347.1	predicted protein	Populus trichocarpa	861	520 bits (1338)	e-145	246/312 (78%)	281/312 (90%)	+1

KEGG Pathway	GO
Contig1429[1 Pathway]	Contig1429[8 GoTerm]

Pathway Informations
First-level terms	Second-level terms	KEGG pathway Num	KEGG pathway Name	KEGG pathway Description	contig Name	locusName	project Name
Metabolism	Carbohydrate Metabolism	00500	Starch and sucrose metabolism	[PATH:ath00500]	Contig1429	AT1G68020	FCTEVCP

GO Informations
Locus Name	Go Name	Go Class Descriptions	GO id	Anotations01
AT1G68020	AT1G68020	"alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity"	GO:0003825	transferase activity
AT1G68020	AT1G68020	trehalose-phosphatase activity	GO:0004805	hydrolase activity
AT1G68020	AT1G68020	trehalose-phosphatase activity	GO:0004805	hydrolase activity
AT1G68020	AT1G68020	trehalose biosynthetic process	GO:0005992	other cellular processes
AT1G68020	AT1G68020	trehalose biosynthetic process	GO:0005992	other metabolic processes
AT1G68020	AT1G68020	trehalose biosynthetic process	GO:0005992	other cellular processes
AT1G68020	AT1G68020	trehalose biosynthetic process	GO:0005992	other metabolic processes
AT1G68020	AT1G68020	"transferase activity, transferring glycosyl groups"	GO:0016757	transferase activity

Gene Network Informations
Gene Network	Interact with..
Contig1429[interact with..]	Not found!