Contig View

Back [Phalaenopsis Transcriptome]

Library Name: Contig Lists:

Contig Information:

Project Name	Query Name	Length of query
FCTEVCP	Contig0349	1002

Contig Map:

(ProjectName=FCTEVCP SequenceName=Contig0349):
FCTEVCPM084_E11_PDNR-F:
FCTEVCPM038_H04_PDNR-F:
FCTEVCPM063_F01_PDNR-F:
FCTEVCPM071_B02_PDNR-F:

Sequences View:[Contig0349](Contig Seguence)

997 bases 
AAAGATTAGATATGCTGGAATGCTTCAATATGATGGCGAATTAAAGCTTCCAAACCATTATCTTGTTTCTCCTCCCGAGATAGATAGGACATCAGGTCAATACCTTGTGAAGAATGGTATTCGTACTTTCGCTTGCAGTGAGACAGTGAAGTTTGGTCATGTCACCTTTTTCTGGAATGGAAATCGATCTGGATGCTTTGATTCAACACTGGAAGAGTATGTTGAAATTCCAAGTGATGTTGGAATCACCTTTAACGTTCAGCCTAAAATGAAGGCACTTGAAATTGCCGAGAAGGCAAGGGATGCTATTCTCAGCGGCAATTTTGACCAGGTACGAGTTAATATACCGAACGGTGACATGGTAGGACACACTGGTGATATTGAGGCTACCACTGTGGCTTGTGAGGCTGCAGATGTAGCTGTAAAGATGATTCTTGATGCCATTGTGCAAGTGGGTGGCATCTATGTTGTCACTGCAGATCATGGCAATGCTGAGGACATGGTGAAAAGGGGTAAATCTGGGCAGCCAATTTTTGACAAAGAAGGGAAAGTTCAAATTCTCACCTCTCATACCCTTCAACCGGTTCCTATCGCCATCGGCGGCCCCGGCTTGAGTCCCGGTGTTCGTTTCCGGAGTGATGTGCCAGATGGTGGCCTTGCCAATGTTGCTGCTACTGTGCTGAACTTCCATGGATTTGATGCACCCAGTGACTATGAAACCACCCTAATTGAAGTAGTTGAGAACTAAATATACTGTGTAATTTTCTATTTATAATATGCTAATATGATTTTTATATTACTTAAGCTCATAGAAAATCTTAAAATAAGTTTACTCCATTGAACTGGAGAATGGTCTTGAGGTTGCCGGTGGTCAAAGTTTTGGGCTGTGTCATTGTAGGTTGTATTAATGTGTGGAGTTTCTCCCACAATGACTTTCTTGCTTTGAATATTTACGTTACTTTTGAAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Sequences View:[Contig0349](Singleton Sequence)

Contig0349 997  bases 
AAAGATTAGATATGCTGGAATGCTTCAATATGATGGCGAATTAAAGCTTCCAAACCATTATCTTGTTTCTCCTCCCGAGATAGATAGGACATCAGGTCAATACCTTGTGAAGAATGGTATTCGTACTTTCGCTTGCAGTGAGACAGTGAAGTTTGGTCATGTCACCTTTTTCTGGAATGGAAATCGATCTGGATGCTTTGATTCAACACTGGAAGAGTATGTTGAAATTCCAAGTGATGTTGGAATCACCTTTAACGTTCAGCCTAAAATGAAGGCACTTGAAATTGCCGAGAAGGCAAGGGATGCTATTCTCAGCGGCAATTTTGACCAGGTACGAGTTAATATACCGAACGGTGACATGGTAGGACACACTGGTGATATTGAGGCTACCACTGTGGCTTGTGAGGCTGCAGATGTAGCTGTAAAGATGATTCTTGATGCCATTGTGCAAGTGGGTGGCATCTATGTTGTCACTGCAGATCATGGCAATGCTGAGGACATGGTGAAAAGGGGTAAATCTGGGCAGCCAATTTTTGACAAAGAAGGGAAAGTTCAAATTCTCACCTCTCATACCCTTCAACCGGTTCCTATCGCCATCGGCGGCCCCGGCTTGAGTCCCGGTGTTCGTTTCCGGAGTGATGTGCCAGATGGTGGCCTTGCCAATGTTGCTGCTACTGTGCTGAACTTCCATGGATTTGATGCACCCAGTGACTATGAAACCACCCTAATTGAAGTAGTTGAGAACTAAATATACTGTGTAATTTTCTATTTATAATATGCTAATATGATTTTTATATTACTTAAGCTCATAGAAAATCTTAAAATAAGTTTACTCCATTGAACTGGAGAATGGTCTTGAGGTTGCCGGTGGTCAAAGTTTTGGGCTGTGTCATTGTAGGTTGTATTAATGTGTGGAGTTTCTCCCACAATGACTTTCTTGCTTTGAATATTTACGTTACTTTTGAAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Contig Annotation:

GenBank	Accession number (Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
ref	NP_001044625.1	Os01g0817700	Oryza sativa (japonica cultivar-group)	559	441 bits (1134)	e-122	212/248 (85%)	231/248 (93%)	+2

KEGG Pathway	GO
Contig0349[1 Pathway]	Contig0349[51 GoTerm]

Pathway Informations
First-level terms	Second-level terms	KEGG pathway Num	KEGG pathway Name	KEGG pathway Description	contig Name	locusName	project Name
Metabolism	Carbohydrate Metabolism	00010	Glycolysis / Gluconeogenesis	[PATH:ath00010]	Contig0349	AT1G09780	FCTEVCP

GO Informations
Locus Name	Go Name	Go Class Descriptions	GO id	Anotations01
AT1G09780	AT1G09780	chloroplast	GO:0009507	chloroplast
AT1G09780	AT1G09780	plasma membrane	GO:0005886	plasma membrane
AT1G09780	AT1G09780	plasma membrane	GO:0005886	plasma membrane
AT1G09780	AT1G09780	catalytic activity	GO:0003824	other enzyme activity
AT1G09780	AT1G09780	phosphoglycerate mutase activity	GO:0004619	other enzyme activity
AT1G09780	AT1G09780	manganese ion binding	GO:0030145	other binding
AT1G09780	AT1G09780	response to cadmium ion	GO:0046686	other biological processes
AT1G09780	AT1G09780	metal ion binding	GO:0046872	other binding
AT1G09780	AT1G09780	cytosol	GO:0005829	cytosol
AT1G09780	AT1G09780	mitochondrial envelope	GO:0005740	mitochondria
AT1G09780	AT1G09780	mitochondrial envelope	GO:0005740	other cytoplasmic components
AT1G09780	AT1G09780	mitochondrial envelope	GO:0005740	other intracellular components
AT1G09780	AT1G09780	response to cold	GO:0009409	response to stress
AT1G09780	AT1G09780	response to cold	GO:0009409	response to stress
AT1G09780	AT1G09780	response to cold	GO:0009409	response to abiotic or biotic stimulus
AT1G09780	AT1G09780	response to cold	GO:0009409	response to abiotic or biotic stimulus
AT1G09780	AT1G09780	"2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity"	GO:0046537	other enzyme activity
AT1G09780	AT1G09780	chloroplast	GO:0009507	chloroplast
AT1G09780	AT1G09780	plasma membrane	GO:0005886	plasma membrane
AT1G09780	AT1G09780	plasma membrane	GO:0005886	plasma membrane
AT1G09780	AT1G09780	catalytic activity	GO:0003824	other enzyme activity
AT1G09780	AT1G09780	phosphoglycerate mutase activity	GO:0004619	other enzyme activity
AT1G09780	AT1G09780	manganese ion binding	GO:0030145	other binding
AT1G09780	AT1G09780	response to cadmium ion	GO:0046686	other biological processes
AT1G09780	AT1G09780	metal ion binding	GO:0046872	other binding
AT1G09780	AT1G09780	cytosol	GO:0005829	cytosol
AT1G09780	AT1G09780	mitochondrial envelope	GO:0005740	mitochondria
AT1G09780	AT1G09780	mitochondrial envelope	GO:0005740	other cytoplasmic components
AT1G09780	AT1G09780	mitochondrial envelope	GO:0005740	other intracellular components
AT1G09780	AT1G09780	response to cold	GO:0009409	response to stress
AT1G09780	AT1G09780	response to cold	GO:0009409	response to stress
AT1G09780	AT1G09780	response to cold	GO:0009409	response to abiotic or biotic stimulus
AT1G09780	AT1G09780	response to cold	GO:0009409	response to abiotic or biotic stimulus
AT1G09780	AT1G09780	"2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity"	GO:0046537	other enzyme activity
AT1G09780	AT1G09780	chloroplast	GO:0009507	chloroplast
AT1G09780	AT1G09780	plasma membrane	GO:0005886	plasma membrane
AT1G09780	AT1G09780	plasma membrane	GO:0005886	plasma membrane
AT1G09780	AT1G09780	catalytic activity	GO:0003824	other enzyme activity
AT1G09780	AT1G09780	phosphoglycerate mutase activity	GO:0004619	other enzyme activity
AT1G09780	AT1G09780	manganese ion binding	GO:0030145	other binding
AT1G09780	AT1G09780	response to cadmium ion	GO:0046686	other biological processes
AT1G09780	AT1G09780	metal ion binding	GO:0046872	other binding
AT1G09780	AT1G09780	cytosol	GO:0005829	cytosol
AT1G09780	AT1G09780	mitochondrial envelope	GO:0005740	mitochondria
AT1G09780	AT1G09780	mitochondrial envelope	GO:0005740	other cytoplasmic components
AT1G09780	AT1G09780	mitochondrial envelope	GO:0005740	other intracellular components
AT1G09780	AT1G09780	response to cold	GO:0009409	response to stress
AT1G09780	AT1G09780	response to cold	GO:0009409	response to stress
AT1G09780	AT1G09780	response to cold	GO:0009409	response to abiotic or biotic stimulus
AT1G09780	AT1G09780	response to cold	GO:0009409	response to abiotic or biotic stimulus
AT1G09780	AT1G09780	"2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity"	GO:0046537	other enzyme activity

Gene Network Informations
Gene Network	Interact with..
Contig0349[interact with..]	Not found!