Contig View

Back [Phalaenopsis Transcriptome]

Library Name: Contig Lists:

Contig Information:

Project Name	Query Name	Length of query
FCTEVCP	Contig0235	1415

Contig Map:

(ProjectName=FCTEVCP SequenceName=Contig0235):
FCTEVCPM091_D07_PDNR-F:
FCTEVCPM113_B06_PDNR-F:
FCTEVCPM108_H05_PDNR-F:
FCTEVCPM108_D03_PDNR-F:
FCTEVCPM031_C06_PDNR-F:

Sequences View:[Contig0235](Contig Seguence)

1415 bases 
GATTTTCAAGTTATTTCTCCTCTCTTTTGCTCCCATATAGGGATTCTTTAACCAGTTGCAGAATGGGCAGCACTGGAAGCGATAGAATCAACTATGGGGAGCACACCTATGCTAACTTGGAGAGGGAGCCTTACTGGCCCTCAGAGAAGCTCCGTATCTCGATCACCGGGGCTGGAGGCTTCATTGCCTCTCACATTGCAAGGCGTTTGAAGAGCGAGGGACACTACATCGTTGCCTCCGATTGGAAGAAGAATGAGCACATGACGGAGGATATGTTCTGCCATGAGTTCCATCTCGTGGATCTGAGGGTTATGGACAATTGCCTCAAGGTTACTCAGGGTGTGGACCATGTCTTCAATCTTGCTGCAGATATGGGAGGGATGGGTTTCATTCAATCAAACCATTCTGTGATTATGTACAACAACACCATGATCAGCTTCAACATGCTTGAGGCTGCCAGGATTAATGGGGTTAAGAGGTTCTTCTATGCGTCTAGTGCTTGTATCTACCCTGAATTCAAGCAATTAGAAACAAATGTGAGCCTGAAGGAGTCTGATGCATGGCCTGCTGAGCCTCAAGATGCTTATGGCTTGGAGAAGCTTGCAAGTGAGGAATTGTGCAAGCACTACACAAAGGACTTTGGTATTGAATGCCGAATAGGGAGATTCCATAATATTTATGGCCCATTTGGCACATGGAAGGGTGGAAGAGAGAAGGCCCCGGCAGCCTTCTGTAGGAAGGCTATTACTTCAACAGACAAATTTGAAATGTGGGGGGATGGCCTCCAGACGCGGTCCTTCACATTTATAGATGAATGTGTGGAAGGTGTTCTCAGATTAACAAAGTCGGATTTCCGTGAGCCGCTAAACATCGGTAGTGATGAGATGGTCAGCATGAATGAGATGGCTGAAATAGTCCTTAGCTTCGATGATAAGAAGCTTCCAATTCAGCACATTCCTGGTCCTGAGGGTGTTCGAGGCCGTAACTCCGATAATAATCTGATCAAGGAAAAGCTTGGCTGGGCTCCAACCATGAAATTGAAGGATGGACTGAGGATCACATATTTCTGGATAAAGGAGCAAATTGAGAAGGAGAAAAGAGAAGGTGTTGACTTGTCCATTTATGGGACATCAAAGGTTGTTGGAACTCAAGCTCCGGTTCAGCTTGGCTCTCTCCGTGCTGCTGACGGAAGGAATGAAATTGGTAAACTTGAGCTTCATCATGGCTCTTTGAAACTAAGATGTTATTTGTACCAGCGTTCAGTAATATCTTAAGCTTTGATATTAATTTTTGGTCATTGTTTTTCCTCCAGATCATTTGTAGAACATGTTATTGTGGTGCTTTATTCTGTCTAGAATATTAATAACAATTTAAAGCAATGTGCTTTTCTTACAAAAAAAAAAAAAAAAAAAAAA

Sequences View:[Contig0235](Singleton Sequence)

Contig0235 1415  bases 
GATTTTCAAGTTATTTCTCCTCTCTTTTGCTCCCATATAGGGATTCTTTAACCAGTTGCAGAATGGGCAGCACTGGAAGCGATAGAATCAACTATGGGGAGCACACCTATGCTAACTTGGAGAGGGAGCCTTACTGGCCCTCAGAGAAGCTCCGTATCTCGATCACCGGGGCTGGAGGCTTCATTGCCTCTCACATTGCAAGGCGTTTGAAGAGCGAGGGACACTACATCGTTGCCTCCGATTGGAAGAAGAATGAGCACATGACGGAGGATATGTTCTGCCATGAGTTCCATCTCGTGGATCTGAGGGTTATGGACAATTGCCTCAAGGTTACTCAGGGTGTGGACCATGTCTTCAATCTTGCTGCAGATATGGGAGGGATGGGTTTCATTCAATCAAACCATTCTGTGATTATGTACAACAACACCATGATCAGCTTCAACATGCTTGAGGCTGCCAGGATTAATGGGGTTAAGAGGTTCTTCTATGCGTCTAGTGCTTGTATCTACCCTGAATTCAAGCAATTAGAAACAAATGTGAGCCTGAAGGAGTCTGATGCATGGCCTGCTGAGCCTCAAGATGCTTATGGCTTGGAGAAGCTTGCAAGTGAGGAATTGTGCAAGCACTACACAAAGGACTTTGGTATTGAATGCCGAATAGGGAGATTCCATAATATTTATGGCCCATTTGGCACATGGAAGGGTGGAAGAGAGAAGGCCCCGGCAGCCTTCTGTAGGAAGGCTATTACTTCAACAGACAAATTTGAAATGTGGGGGGATGGCCTCCAGACGCGGTCCTTCACATTTATAGATGAATGTGTGGAAGGTGTTCTCAGATTAACAAAGTCGGATTTCCGTGAGCCGCTAAACATCGGTAGTGATGAGATGGTCAGCATGAATGAGATGGCTGAAATAGTCCTTAGCTTCGATGATAAGAAGCTTCCAATTCAGCACATTCCTGGTCCTGAGGGTGTTCGAGGCCGTAACTCCGATAATAATCTGATCAAGGAAAAGCTTGGCTGGGCTCCAACCATGAAATTGAAGGATGGACTGAGGATCACATATTTCTGGATAAAGGAGCAAATTGAGAAGGAGAAAAGAGAAGGTGTTGACTTGTCCATTTATGGGACATCAAAGGTTGTTGGAACTCAAGCTCCGGTTCAGCTTGGCTCTCTCCGTGCTGCTGACGGAAGGAATGAAATTGGTAAACTTGAGCTTCATCATGGCTCTTTGAAACTAAGATGTTATTTGTACCAGCGTTCAGTAATATCTTAAGCTTTGATATTAATTTTTGGTCATTGTTTTTCCTCCAGATCATTTGTAGAACATGTTATTGTGGTGCTTTATTCTGTCTAGAATATTAATAACAATTTAAAGCAATGTGCTTTTCTTACAAAAAAAAAAAAAAAAAAAAAA

Contig Annotation:

GenBank	Accession number (Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
ref	XP_002531297.1	dtdp-glucose 4-6-dehydratase, putative	Ricinus communis	376	733 bits (1891)	0.0	352/377 (93%)	367/377 (97%)	+3

KEGG Pathway	GO
Contig0235[2 Pathway]	Contig0235[36 GoTerm]

Pathway Informations
First-level terms	Second-level terms	KEGG pathway Num	KEGG pathway Name	KEGG pathway Description	contig Name	locusName	project Name
Metabolism	Carbohydrate Metabolism	00520	Amino sugar and nucleotide sugar metabolism	[PATH:ath00520]	Contig0235	AT5G28840	FCTEVCP
Metabolism	Carbohydrate Metabolism	00053	Ascorbate and aldarate metabolism	[PATH:ath00053]	Contig0235	AT5G28840	FCTEVCP

GO Informations
Locus Name	Go Name	Go Class Descriptions	GO id	Anotations01
AT5G28840	AT5G28840	cellular_component	GO:0005575	unknown cellular components
AT5G28840	AT5G28840	catalytic activity	GO:0003824	other enzyme activity
AT5G28840	AT5G28840	nucleotide-sugar metabolic process	GO:0009225	other cellular processes
AT5G28840	AT5G28840	nucleotide-sugar metabolic process	GO:0009225	other metabolic processes
AT5G28840	AT5G28840	L-ascorbic acid biosynthetic process	GO:0019853	other cellular processes
AT5G28840	AT5G28840	L-ascorbic acid biosynthetic process	GO:0019853	other metabolic processes
AT5G28840	AT5G28840	"GDP-mannose 3,5-epimerase activity"	GO:0047918	other enzyme activity
AT5G28840	AT5G28840	"GDP-mannose 3,5-epimerase activity"	GO:0047918	other enzyme activity
AT5G28840	AT5G28840	NAD or NADH binding	GO:0051287	other binding
AT5G28840	AT5G28840	cellular_component	GO:0005575	unknown cellular components
AT5G28840	AT5G28840	catalytic activity	GO:0003824	other enzyme activity
AT5G28840	AT5G28840	nucleotide-sugar metabolic process	GO:0009225	other cellular processes
AT5G28840	AT5G28840	nucleotide-sugar metabolic process	GO:0009225	other metabolic processes
AT5G28840	AT5G28840	L-ascorbic acid biosynthetic process	GO:0019853	other cellular processes
AT5G28840	AT5G28840	L-ascorbic acid biosynthetic process	GO:0019853	other metabolic processes
AT5G28840	AT5G28840	"GDP-mannose 3,5-epimerase activity"	GO:0047918	other enzyme activity
AT5G28840	AT5G28840	"GDP-mannose 3,5-epimerase activity"	GO:0047918	other enzyme activity
AT5G28840	AT5G28840	NAD or NADH binding	GO:0051287	other binding
AT5G28840	AT5G28840	cellular_component	GO:0005575	unknown cellular components
AT5G28840	AT5G28840	catalytic activity	GO:0003824	other enzyme activity
AT5G28840	AT5G28840	nucleotide-sugar metabolic process	GO:0009225	other cellular processes
AT5G28840	AT5G28840	nucleotide-sugar metabolic process	GO:0009225	other metabolic processes
AT5G28840	AT5G28840	L-ascorbic acid biosynthetic process	GO:0019853	other cellular processes
AT5G28840	AT5G28840	L-ascorbic acid biosynthetic process	GO:0019853	other metabolic processes
AT5G28840	AT5G28840	"GDP-mannose 3,5-epimerase activity"	GO:0047918	other enzyme activity
AT5G28840	AT5G28840	"GDP-mannose 3,5-epimerase activity"	GO:0047918	other enzyme activity
AT5G28840	AT5G28840	NAD or NADH binding	GO:0051287	other binding
AT5G28840	AT5G28840	cellular_component	GO:0005575	unknown cellular components
AT5G28840	AT5G28840	catalytic activity	GO:0003824	other enzyme activity
AT5G28840	AT5G28840	nucleotide-sugar metabolic process	GO:0009225	other cellular processes
AT5G28840	AT5G28840	nucleotide-sugar metabolic process	GO:0009225	other metabolic processes
AT5G28840	AT5G28840	L-ascorbic acid biosynthetic process	GO:0019853	other cellular processes
AT5G28840	AT5G28840	L-ascorbic acid biosynthetic process	GO:0019853	other metabolic processes
AT5G28840	AT5G28840	"GDP-mannose 3,5-epimerase activity"	GO:0047918	other enzyme activity
AT5G28840	AT5G28840	"GDP-mannose 3,5-epimerase activity"	GO:0047918	other enzyme activity
AT5G28840	AT5G28840	NAD or NADH binding	GO:0051287	other binding

Gene Network Informations
Gene Network	Interact with..
Contig0235[interact with..]	Not found!