Contig View

Back [Phalaenopsis Transcriptome]

Library Name: Contig Lists:

Contig Information:

Project Name	Query Name	Length of query
FAECPM	FAECPM039_B02_PDNR-F	1065

Contig Map:

(ProjectName=FAECPM
SequenceName=NoContigFind):

Sequences View:[NoContigFind](Contig Seguence)

Sequences View:[FAECPM039_B02_PDNR-F](Singleton Sequence)

FAECPM039_B02_PDNR-F 1065  bases 
GGCTCTCTTTCTCAATAGGTTTTCCGGCCACTGTCTTTACGAACTCCGATGGCAAAGGATCCAGTTCATGTTCTCGTCACCGGCGCCGCAGGACAAATTGGGTATGCTCTTGTCCCAATGATTGCTAGGGGTGCCATGCTTGGTCTTGACCAGCCTGTTGTATTGCATTTGCTTGACATTCCACCAGCGGCAGAAGCTCTCAATGGTGTTAAGATGGAGCTAGTCGATGCAGCATTTCCGCTTCTGAAGGGAGTTGTTGCTACTACTGATGTTGTTGAGGCTTGCACTGGAGTAAATATAGCAGTGATGGTTGGTGGGTTCCCAAGAAAGGAAGGTATGGAAAGGAAGGATGTGATGTCAAAGAATGTATCCATCTATAAGTCTCAGGCTTCAGCGCTTGAAAAGCATGCTGCAGCAAGCTGCAAGGTTTTGGTTGTTGCTAATCCAGCCAATACCAATGCCCTCATATTGAAGGAGTTCGCTCCTTCTATACCAGAGAAGAATATTACTTGTTTGACACGGTTAGATCACAACAGGGCACTTGGCCAAATTTCAGAGCGATTAAATGTTCACGTCAGTGATGTTAAGAATGTTATTATTTGGGGTAACCATTCATCTACTCAGTACCCTGATGTAAGCCATGCTACGGTGAAAACTCATGGTGGTGAAAATCATGTCCGTGAACTCATTGCTGATGATGAGTGGCTGAGAGGGGAATTCATTACAACAGTGCAACAACCGCGGTGCTGCTATCATCAAAGCTAGGAAGCTCTCGAGTGCTCTCTCTGCTGCAAGTTCGGCTTGTGATCATATCCATGACTGGATCCTTGGGACCCCAGAGGGAACTTGGGTTTCCATGGGAGTTTACTCTGATGGATCTACAATGTACCGGCTGGGTTGATTTATTCTTTCCCTGTGACCAGCCGTGATGAGAGTGTCTATGTCAGGACTGTCAATGATGAGTTTCAGAGAGCTGATGCGACGCTGAGAGCTATGAGAAGGCTCTGCATATCATGCTTCTAATTACTGATTGGCATCAGCACTCAGTTGCACTCGCGTTCTATA

Contig Annotation:

GenBank	Accession number (Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
dbj	BAF44222.1	malate dehydrogenase like-protein	Iris x hollandica	307	436 bits (1120)	e-120	232/297 (78%)	246/297 (82%), Gaps = 3/297 (1%)	+1

KEGG Pathway	GO
NoContigFind[4 Pathway]	NoContigFind[108 GoTerm]

Pathway Informations
First-level terms	Second-level terms	KEGG pathway Num	KEGG pathway Name	KEGG pathway Description	contig Name	locusName	project Name
Metabolism	Carbohydrate Metabolism	00020	Citrate cycle (TCA cycle)	[PATH:ath00020]	FAECPM039_B02_PDNR-F	AT5G43330	FAECPM
Metabolism	Carbohydrate Metabolism	00630	Glyoxylate and dicarboxylate metabolism	[PATH:ath00630]	FAECPM039_B02_PDNR-F	AT5G43330	FAECPM
Metabolism	Carbohydrate Metabolism	00620	Pyruvate metabolism	[PATH:ath00620]	FAECPM039_B02_PDNR-F	AT5G43330	FAECPM
Metabolism	Energy Metabolism	00710	Carbon fixation in photosynthetic organisms	[PATH:ath00710]	FAECPM039_B02_PDNR-F	AT5G43330	FAECPM

GO Informations
Locus Name	Go Name	Go Class Descriptions	GO id	Anotations01
AT5G43330	AT5G43330	malate dehydrogenase activity	GO:0016615	other enzyme activity
AT5G43330	AT5G43330	plasma membrane	GO:0005886	plasma membrane
AT5G43330	AT5G43330	catalytic activity	GO:0003824	other enzyme activity
AT5G43330	AT5G43330	binding	GO:0005488	other binding
AT5G43330	AT5G43330	malate dehydrogenase activity	GO:0016615	other enzyme activity
AT5G43330	AT5G43330	oxidoreductase activity	GO:0016491	other enzyme activity
AT5G43330	AT5G43330	"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor"	GO:0016616	other enzyme activity
AT5G43330	AT5G43330	carbohydrate metabolic process	GO:0005975	other metabolic processes
AT5G43330	AT5G43330	glycolysis	GO:0006096	other cellular processes
AT5G43330	AT5G43330	glycolysis	GO:0006096	other metabolic processes
AT5G43330	AT5G43330	glycolysis	GO:0006096	electron transport or energy pathways
AT5G43330	AT5G43330	malate metabolic process	GO:0006108	other cellular processes
AT5G43330	AT5G43330	malate metabolic process	GO:0006108	other metabolic processes
AT5G43330	AT5G43330	metabolic process	GO:0008152	other metabolic processes
AT5G43330	AT5G43330	L-malate dehydrogenase activity	GO:0030060	other enzyme activity
AT5G43330	AT5G43330	cellular carbohydrate metabolic process	GO:0044262	other cellular processes
AT5G43330	AT5G43330	cellular carbohydrate metabolic process	GO:0044262	other metabolic processes
AT5G43330	AT5G43330	oxidation-reduction process	GO:0055114	other metabolic processes
AT5G43330	AT5G43330	malate dehydrogenase activity	GO:0016615	other enzyme activity
AT5G43330	AT5G43330	plasma membrane	GO:0005886	plasma membrane
AT5G43330	AT5G43330	catalytic activity	GO:0003824	other enzyme activity
AT5G43330	AT5G43330	binding	GO:0005488	other binding
AT5G43330	AT5G43330	malate dehydrogenase activity	GO:0016615	other enzyme activity
AT5G43330	AT5G43330	oxidoreductase activity	GO:0016491	other enzyme activity
AT5G43330	AT5G43330	"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor"	GO:0016616	other enzyme activity
AT5G43330	AT5G43330	carbohydrate metabolic process	GO:0005975	other metabolic processes
AT5G43330	AT5G43330	glycolysis	GO:0006096	other cellular processes
AT5G43330	AT5G43330	glycolysis	GO:0006096	other metabolic processes
AT5G43330	AT5G43330	glycolysis	GO:0006096	electron transport or energy pathways
AT5G43330	AT5G43330	malate metabolic process	GO:0006108	other cellular processes
AT5G43330	AT5G43330	malate metabolic process	GO:0006108	other metabolic processes
AT5G43330	AT5G43330	metabolic process	GO:0008152	other metabolic processes
AT5G43330	AT5G43330	L-malate dehydrogenase activity	GO:0030060	other enzyme activity
AT5G43330	AT5G43330	cellular carbohydrate metabolic process	GO:0044262	other cellular processes
AT5G43330	AT5G43330	cellular carbohydrate metabolic process	GO:0044262	other metabolic processes
AT5G43330	AT5G43330	oxidation-reduction process	GO:0055114	other metabolic processes
AT5G43330	AT5G43330	malate dehydrogenase activity	GO:0016615	other enzyme activity
AT5G43330	AT5G43330	plasma membrane	GO:0005886	plasma membrane
AT5G43330	AT5G43330	catalytic activity	GO:0003824	other enzyme activity
AT5G43330	AT5G43330	binding	GO:0005488	other binding
AT5G43330	AT5G43330	malate dehydrogenase activity	GO:0016615	other enzyme activity
AT5G43330	AT5G43330	oxidoreductase activity	GO:0016491	other enzyme activity
AT5G43330	AT5G43330	"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor"	GO:0016616	other enzyme activity
AT5G43330	AT5G43330	carbohydrate metabolic process	GO:0005975	other metabolic processes
AT5G43330	AT5G43330	glycolysis	GO:0006096	other cellular processes
AT5G43330	AT5G43330	glycolysis	GO:0006096	other metabolic processes
AT5G43330	AT5G43330	malate dehydrogenase activity	GO:0016615	other enzyme activity
AT5G43330	AT5G43330	plasma membrane	GO:0005886	plasma membrane
AT5G43330	AT5G43330	catalytic activity	GO:0003824	other enzyme activity
AT5G43330	AT5G43330	binding	GO:0005488	other binding
AT5G43330	AT5G43330	malate dehydrogenase activity	GO:0016615	other enzyme activity
AT5G43330	AT5G43330	oxidoreductase activity	GO:0016491	other enzyme activity
AT5G43330	AT5G43330	"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor"	GO:0016616	other enzyme activity
AT5G43330	AT5G43330	carbohydrate metabolic process	GO:0005975	other metabolic processes
AT5G43330	AT5G43330	glycolysis	GO:0006096	other cellular processes
AT5G43330	AT5G43330	glycolysis	GO:0006096	other metabolic processes
AT5G43330	AT5G43330	glycolysis	GO:0006096	electron transport or energy pathways
AT5G43330	AT5G43330	malate metabolic process	GO:0006108	other cellular processes
AT5G43330	AT5G43330	malate metabolic process	GO:0006108	other metabolic processes
AT5G43330	AT5G43330	metabolic process	GO:0008152	other metabolic processes
AT5G43330	AT5G43330	L-malate dehydrogenase activity	GO:0030060	other enzyme activity
AT5G43330	AT5G43330	cellular carbohydrate metabolic process	GO:0044262	other cellular processes
AT5G43330	AT5G43330	cellular carbohydrate metabolic process	GO:0044262	other metabolic processes
AT5G43330	AT5G43330	oxidation-reduction process	GO:0055114	other metabolic processes
AT5G43330	AT5G43330	malate dehydrogenase activity	GO:0016615	other enzyme activity
AT5G43330	AT5G43330	plasma membrane	GO:0005886	plasma membrane
AT5G43330	AT5G43330	catalytic activity	GO:0003824	other enzyme activity
AT5G43330	AT5G43330	binding	GO:0005488	other binding
AT5G43330	AT5G43330	malate dehydrogenase activity	GO:0016615	other enzyme activity
AT5G43330	AT5G43330	oxidoreductase activity	GO:0016491	other enzyme activity
AT5G43330	AT5G43330	"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor"	GO:0016616	other enzyme activity
AT5G43330	AT5G43330	carbohydrate metabolic process	GO:0005975	other metabolic processes
AT5G43330	AT5G43330	glycolysis	GO:0006096	other cellular processes
AT5G43330	AT5G43330	glycolysis	GO:0006096	other metabolic processes
AT5G43330	AT5G43330	glycolysis	GO:0006096	electron transport or energy pathways
AT5G43330	AT5G43330	malate metabolic process	GO:0006108	other cellular processes
AT5G43330	AT5G43330	malate metabolic process	GO:0006108	other metabolic processes
AT5G43330	AT5G43330	metabolic process	GO:0008152	other metabolic processes
AT5G43330	AT5G43330	L-malate dehydrogenase activity	GO:0030060	other enzyme activity
AT5G43330	AT5G43330	cellular carbohydrate metabolic process	GO:0044262	other cellular processes
AT5G43330	AT5G43330	cellular carbohydrate metabolic process	GO:0044262	other metabolic processes
AT5G43330	AT5G43330	oxidation-reduction process	GO:0055114	other metabolic processes
AT5G43330	AT5G43330	malate dehydrogenase activity	GO:0016615	other enzyme activity
AT5G43330	AT5G43330	plasma membrane	GO:0005886	plasma membrane
AT5G43330	AT5G43330	catalytic activity	GO:0003824	other enzyme activity
AT5G43330	AT5G43330	binding	GO:0005488	other binding
AT5G43330	AT5G43330	malate dehydrogenase activity	GO:0016615	other enzyme activity
AT5G43330	AT5G43330	oxidoreductase activity	GO:0016491	other enzyme activity
AT5G43330	AT5G43330	"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor"	GO:0016616	other enzyme activity
AT5G43330	AT5G43330	carbohydrate metabolic process	GO:0005975	other metabolic processes
AT5G43330	AT5G43330	glycolysis	GO:0006096	other cellular processes
AT5G43330	AT5G43330	glycolysis	GO:0006096	other metabolic processes
AT5G43330	AT5G43330	glycolysis	GO:0006096	electron transport or energy pathways
AT5G43330	AT5G43330	malate metabolic process	GO:0006108	other cellular processes
AT5G43330	AT5G43330	malate metabolic process	GO:0006108	other metabolic processes
AT5G43330	AT5G43330	metabolic process	GO:0008152	other metabolic processes
AT5G43330	AT5G43330	L-malate dehydrogenase activity	GO:0030060	other enzyme activity
AT5G43330	AT5G43330	cellular carbohydrate metabolic process	GO:0044262	other cellular processes
AT5G43330	AT5G43330	cellular carbohydrate metabolic process	GO:0044262	other metabolic processes
AT5G43330	AT5G43330	oxidation-reduction process	GO:0055114	other metabolic processes
AT5G43330	AT5G43330	glycolysis	GO:0006096	electron transport or energy pathways
AT5G43330	AT5G43330	malate metabolic process	GO:0006108	other cellular processes
AT5G43330	AT5G43330	malate metabolic process	GO:0006108	other metabolic processes
AT5G43330	AT5G43330	metabolic process	GO:0008152	other metabolic processes
AT5G43330	AT5G43330	L-malate dehydrogenase activity	GO:0030060	other enzyme activity
AT5G43330	AT5G43330	cellular carbohydrate metabolic process	GO:0044262	other cellular processes
AT5G43330	AT5G43330	cellular carbohydrate metabolic process	GO:0044262	other metabolic processes
AT5G43330	AT5G43330	oxidation-reduction process	GO:0055114	other metabolic processes

Gene Network Informations
Gene Network	Interact with..
FAECPM039_B02_PDNR-F[interact with..]	Not found!