Contig View

Back [Phalaenopsis Transcriptome]

Library Name: Contig Lists:

Contig Information:

Project Name	Query Name	Length of query
FAECPM	FAECPM030_C10_PDNR-F	1039

Contig Map:

(ProjectName=FAECPM
SequenceName=NoContigFind):

Sequences View:[NoContigFind](Contig Seguence)

Sequences View:[FAECPM030_C10_PDNR-F](Singleton Sequence)

FAECPM030_C10_PDNR-F 1039  bases 
GATGCATGGACCAAAAGAGGATCAACGCCTGGCAATTGTTCTGGTTGGCCTGCCAGCTCGGGGAAAGACTTTTACAGCGGCCAAACTAACAAGATATCTACGATGGTTAGGTCATGAAACAAAACATTTCAATGTTGGCAAGTATCGTCGGCTGAAGCATGGATTGAATCAGGGTGCTGATTTTTTTCGAGGGGACAATGCAGAAGGTGTGGAAGCACGGAATGAGGTTGCGGCCTTAGCAATGGATGATATGTTATCTTGGATGCAGGAAGGAGGTCAGGTTGGCATATTTGACGCTACCAATAGCACCAAGCAACGAAGGAATATGATTACGAAAATGGCTGAAGGAAAGTGTAAGATTATATTTTTGGAGACAATTTGTAATGATGAACGCATAATTGAAAGGAATATTCGACTCAAAATCCAACAAAGCCCTGATTATGCAGAAGAGACTGATTTTGAAGCTGGAATGCAGGACTTTAAGGAACGACTAGCCAATTATGACAAGGTTTATGAGCCAGTTGAAGAAGGTTCCTATGTAAAGATGATTGACATGGTCGGTGGAAATGACGGGCAGATACAAGTGAACAACATCAGTGGATATCTTCCTGGTCGGATAGTCTTCTTCTTGGTGAATACTCATCTCACACCCCGCCCTATTTTGCTAACTAGGCATGGTGAGAGCCAAGATAATGTTAGGGGAAGAGTTGGTGGAGATGCAATTTTGAGTGAAACAGGAGAGGTTTACTCAAAAAAAACTGGCCAACTTTATAAAGAACCGACTTAAATCTGAAAAGACGGCTTCGATATGGACAAGCACTCTACAACGAACAATATTAACAGCAGCTCCGATTGTTGGATTCCCCAAGATACAATGGCGTGCTCTTGAAGAGATAAATGCAGGAGCATGTGATGGAATGACTTACGAAGAGATAAGAGGAACATGCCTGAGAATATGAATCTCGTCAGAAGACAGTTACGCTATCGTATCCCTCGCGGTGAATCATATCTTGATATCATACAAAGGCTAGAACCCGTA

Contig Annotation:

GenBank	Accession number (Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
ref	XP_002313981.1	predicted protein	Populus trichocarpa	498	487 bits (1254)	e-136	248/350 (70%)	280/350 (80%), Gaps = 4/350 (1%)	+2

KEGG Pathway	GO
NoContigFind[1 Pathway]	NoContigFind[8 GoTerm]

Pathway Informations
First-level terms	Second-level terms	KEGG pathway Num	KEGG pathway Name	KEGG pathway Description	contig Name	locusName	project Name
Metabolism	Carbohydrate Metabolism	00051	Fructose and mannose metabolism	[PATH:ath00051]	FAECPM030_C10_PDNR-F	AT1G07110	FAECPM

GO Informations
Locus Name	Go Name	Go Class Descriptions	GO id	Anotations01
AT1G07110	AT1G07110	plasma membrane	GO:0005886	plasma membrane
AT1G07110	AT1G07110	cytosol	GO:0005829	cytosol
AT1G07110	AT1G07110	fructose metabolic process	GO:0006000	other cellular processes
AT1G07110	AT1G07110	fructose metabolic process	GO:0006000	other metabolic processes
AT1G07110	AT1G07110	N-terminal protein myristoylation	GO:0006499	protein metabolism
AT1G07110	AT1G07110	N-terminal protein myristoylation	GO:0006499	other cellular processes
AT1G07110	AT1G07110	N-terminal protein myristoylation	GO:0006499	other metabolic processes
AT1G07110	AT1G07110	"fructose-2,6-bisphosphate 2-phosphatase activity"	GO:0004331	hydrolase activity

Gene Network Informations
Gene Network	Interact with..
FAECPM030_C10_PDNR-F[interact with..]	Not found!