Contig View

Back [Phalaenopsis Transcriptome]

Library Name: Contig Lists:

Contig Information:

Project Name	Query Name	Length of query
FAECPM	Contig0745	1523

Contig Map:

(ProjectName=FAECPM SequenceName=Contig0745):
FAECPM034_D04_PDNR-F:
FAECPM001_A04_pDNR-F:

Sequences View:[Contig0745](Contig Seguence)

1523 bases 
GATTGGATTGCTAAGTGATGGAGGTGTTCACTCCCGCCTTGATCAATTACAGCTGCTGCTGAAAGGTGCTAGCGAGAATGGCGCCAAAAGAATCAGAGTACATTTTTTAACTGATGGCCGTGATGTCTTAGATGGAAGCAGTGTAGGCTTTGTGGAAACCCTTGAAAATGACCTTAAAAATTTGTGTGAAAATGGCATTGATGCACAGATTGCGTCTGGTGGTGGACGGATGTATGTTACTATGGATCGTTATGAGAATGATTGGGATGTCGTTAAACGGGGCTGGTATGCTCAGGTTCTTGGTGAAGCACCTTACAAGTTCCAAAATGCAGTTGAAGCGGTGAAAGAGCTCAGAAAGGAACCTAAGGCTAATGATCAATATTTGCCTCCATTTGTCATAGTTGATGAGAGTGGCAAAGCAGTCGGCCCAATAGTGGATGGTGATGCTGTCGTCACGTTTAACTTCCGAGCGGACCGAATGGTTATGCTTGCTAAAGCTCTTGAATATGATAACTTTGATAAATTTGACCGTGTCCGTTTTCCAAAGATTAGATATGCTGGAATGCTTCAATATGATGGCGAATTAAAGCTTCCAAACTATTATCTTGTTTCCCCTCCAGAGATAGATAGGACATCAGGTCAATACCTTGTGAAGAATGGTATTCGTACTTTCGCTTGCAGTGAGACAGTGAAGTTCGGTCATGTCACCTTTTTCTGGAATGGAAATCGATCTGGATGCTTTGATTCAACACTGGAAGAGTATGTTGAAATTCCAAGTGATGTTGGAATCACCTTTAACGTTCAGCCTAAAATGAAGGCACTTGAAATTGCCGAGAAGGCAAGGGATGCTATTCTCAGCGGCAAATTTGACCAGGTACGAGTTAATATACCGAACGGTGACATGGTAGGCCACACTGGTGATATTGAGGCTACCACTGTGGCTTGTGAGGCTGCAGATGTAGCTGTAAAGATGATTCTTGATGCCATTGTGCAAGTGGGTGGCATCTTATGTTGTCACTGCAGATCATGGCAATGCTGAGGACATGGTGAAAAGGGGTGAATCTGGGCAGCCACTTTTTGACAAAGAAGGGAAAGGTTCAAATTCTCACCTCTCATACCCTTCAACCGGTTCCTATCGCCATTGGCGGCCCCGGCTTGAGTCCCAGTGTTCGTTTCCGGAGTGATGTGCCAGATGGTGGCCTTGCCAATGTTGCTGCTACTGTGCTGAACTTCCATGGCTTTGAAGCTCCCAGTGACTATGAAACCACCCTAATTGAAGTAGTTGAGAACTAAATATATTGTGTAATTTTCTATTTATAATATGCTAATATGATTTTTATATTACTTATGCTCATAGAAAATCTTAAATAGTTTACTCCATTGAAGTGGAGAATGGTCTTGAGGGGCGGTGGTCAAAGTTTGGGATGTTTCATTATAGTTTGTATTGATGTGGGGGAGTTTCTCCCCAGTGACTTTTCTTGCTTTGAATATTTACGTTACTTTTGAAGGAAAAAAAAAAAAAA

Sequences View:[Contig0745](Singleton Sequence)

Contig0745 1523  bases 
GATTGGATTGCTAAGTGATGGAGGTGTTCACTCCCGCCTTGATCAATTACAGCTGCTGCTGAAAGGTGCTAGCGAGAATGGCGCCAAAAGAATCAGAGTACATTTTTTAACTGATGGCCGTGATGTCTTAGATGGAAGCAGTGTAGGCTTTGTGGAAACCCTTGAAAATGACCTTAAAAATTTGTGTGAAAATGGCATTGATGCACAGATTGCGTCTGGTGGTGGACGGATGTATGTTACTATGGATCGTTATGAGAATGATTGGGATGTCGTTAAACGGGGCTGGTATGCTCAGGTTCTTGGTGAAGCACCTTACAAGTTCCAAAATGCAGTTGAAGCGGTGAAAGAGCTCAGAAAGGAACCTAAGGCTAATGATCAATATTTGCCTCCATTTGTCATAGTTGATGAGAGTGGCAAAGCAGTCGGCCCAATAGTGGATGGTGATGCTGTCGTCACGTTTAACTTCCGAGCGGACCGAATGGTTATGCTTGCTAAAGCTCTTGAATATGATAACTTTGATAAATTTGACCGTGTCCGTTTTCCAAAGATTAGATATGCTGGAATGCTTCAATATGATGGCGAATTAAAGCTTCCAAACTATTATCTTGTTTCCCCTCCAGAGATAGATAGGACATCAGGTCAATACCTTGTGAAGAATGGTATTCGTACTTTCGCTTGCAGTGAGACAGTGAAGTTCGGTCATGTCACCTTTTTCTGGAATGGAAATCGATCTGGATGCTTTGATTCAACACTGGAAGAGTATGTTGAAATTCCAAGTGATGTTGGAATCACCTTTAACGTTCAGCCTAAAATGAAGGCACTTGAAATTGCCGAGAAGGCAAGGGATGCTATTCTCAGCGGCAAATTTGACCAGGTACGAGTTAATATACCGAACGGTGACATGGTAGGCCACACTGGTGATATTGAGGCTACCACTGTGGCTTGTGAGGCTGCAGATGTAGCTGTAAAGATGATTCTTGATGCCATTGTGCAAGTGGGTGGCATCTTATGTTGTCACTGCAGATCATGGCAATGCTGAGGACATGGTGAAAAGGGGTGAATCTGGGCAGCCACTTTTTGACAAAGAAGGGAAAGGTTCAAATTCTCACCTCTCATACCCTTCAACCGGTTCCTATCGCCATTGGCGGCCCCGGCTTGAGTCCCAGTGTTCGTTTCCGGAGTGATGTGCCAGATGGTGGCCTTGCCAATGTTGCTGCTACTGTGCTGAACTTCCATGGCTTTGAAGCTCCCAGTGACTATGAAACCACCCTAATTGAAGTAGTTGAGAACTAAATATATTGTGTAATTTTCTATTTATAATATGCTAATATGATTTTTATATTACTTATGCTCATAGAAAATCTTAAATAGTTTACTCCATTGAAGTGGAGAATGGTCTTGAGGGGCGGTGGTCAAAGTTTGGGATGTTTCATTATAGTTTGTATTGATGTGGGGGAGTTTCTCCCCAGTGACTTTTCTTGCTTTGAATATTTACGTTACTTTTGAAGGAAAAAAAAAAAAAA

Contig Annotation:

GenBank	Accession number (Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
ref	XP_002323696.1	predicted protein	Populus trichocarpa	560	604 bits (1558)	0.0	299/335 (89%)	314/335 (93%)	+2

KEGG Pathway	GO
Contig0745[1 Pathway]	Contig0745[42 GoTerm]

Pathway Informations
First-level terms	Second-level terms	KEGG pathway Num	KEGG pathway Name	KEGG pathway Description	contig Name	locusName	project Name
Metabolism	Carbohydrate Metabolism	00010	Glycolysis / Gluconeogenesis	[PATH:ath00010]	Contig0745	AT3G08590	FAECPM

GO Informations
Locus Name	Go Name	Go Class Descriptions	GO id	Anotations01
AT3G08590	AT3G08590	catalytic activity	GO:0003824	other enzyme activity
AT3G08590	AT3G08590	phosphoglycerate mutase activity	GO:0004619	other enzyme activity
AT3G08590	AT3G08590	manganese ion binding	GO:0030145	other binding
AT3G08590	AT3G08590	response to cadmium ion	GO:0046686	other biological processes
AT3G08590	AT3G08590	metal ion binding	GO:0046872	other binding
AT3G08590	AT3G08590	apoplast	GO:0048046	extracellular
AT3G08590	AT3G08590	cytosol	GO:0005829	cytosol
AT3G08590	AT3G08590	"2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity"	GO:0046537	other enzyme activity
AT3G08590	AT3G08590	catalytic activity	GO:0003824	other enzyme activity
AT3G08590	AT3G08590	phosphoglycerate mutase activity	GO:0004619	other enzyme activity
AT3G08590	AT3G08590	manganese ion binding	GO:0030145	other binding
AT3G08590	AT3G08590	response to cadmium ion	GO:0046686	other biological processes
AT3G08590	AT3G08590	metal ion binding	GO:0046872	other binding
AT3G08590	AT3G08590	apoplast	GO:0048046	extracellular
AT3G08590	AT3G08590	catalytic activity	GO:0003824	other enzyme activity
AT3G08590	AT3G08590	phosphoglycerate mutase activity	GO:0004619	other enzyme activity
AT3G08590	AT3G08590	manganese ion binding	GO:0030145	other binding
AT3G08590	AT3G08590	response to cadmium ion	GO:0046686	other biological processes
AT3G08590	AT3G08590	metal ion binding	GO:0046872	other binding
AT3G08590	AT3G08590	apoplast	GO:0048046	extracellular
AT3G08590	AT3G08590	cytosol	GO:0005829	cytosol
AT3G08590	AT3G08590	"2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity"	GO:0046537	other enzyme activity
AT3G08590	AT3G08590	catalytic activity	GO:0003824	other enzyme activity
AT3G08590	AT3G08590	phosphoglycerate mutase activity	GO:0004619	other enzyme activity
AT3G08590	AT3G08590	manganese ion binding	GO:0030145	other binding
AT3G08590	AT3G08590	response to cadmium ion	GO:0046686	other biological processes
AT3G08590	AT3G08590	metal ion binding	GO:0046872	other binding
AT3G08590	AT3G08590	apoplast	GO:0048046	extracellular
AT3G08590	AT3G08590	catalytic activity	GO:0003824	other enzyme activity
AT3G08590	AT3G08590	phosphoglycerate mutase activity	GO:0004619	other enzyme activity
AT3G08590	AT3G08590	manganese ion binding	GO:0030145	other binding
AT3G08590	AT3G08590	response to cadmium ion	GO:0046686	other biological processes
AT3G08590	AT3G08590	metal ion binding	GO:0046872	other binding
AT3G08590	AT3G08590	apoplast	GO:0048046	extracellular
AT3G08590	AT3G08590	cytosol	GO:0005829	cytosol
AT3G08590	AT3G08590	"2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity"	GO:0046537	other enzyme activity
AT3G08590	AT3G08590	catalytic activity	GO:0003824	other enzyme activity
AT3G08590	AT3G08590	phosphoglycerate mutase activity	GO:0004619	other enzyme activity
AT3G08590	AT3G08590	manganese ion binding	GO:0030145	other binding
AT3G08590	AT3G08590	response to cadmium ion	GO:0046686	other biological processes
AT3G08590	AT3G08590	metal ion binding	GO:0046872	other binding
AT3G08590	AT3G08590	apoplast	GO:0048046	extracellular

Gene Network Informations
Gene Network	Interact with..
Contig0745[interact with..]	Not found!