Contig View

Back [Phalaenopsis Transcriptome]

Library Name: Contig Lists:

Contig Information:

Project Name	Query Name	Length of query
FAECPM	Contig0526	811

Contig Map:

(ProjectName=FAECPM SequenceName=Contig0526):
FAECPM019_D09_PDNR-F:
FAECPM029_E11_PDNR-F:
FAECPM007_H04_PDNRF:

Sequences View:[Contig0526](Contig Seguence)

Sequences View:[Contig0526](Singleton Sequence)

Contig Annotation:

GenBank	Accession number (Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
emb	CAR98204.1	formate dehydrogenase	Lotus japonicus	386	350 bits (899)	7e-95	164/183 (89%)	177/183 (96%)	+2

KEGG Pathway	GO
Contig0526[1 Pathway]	Contig0526[26 GoTerm]

Pathway Informations
First-level terms	Second-level terms	KEGG pathway Num	KEGG pathway Name	KEGG pathway Description	contig Name	locusName	project Name
Metabolism	Carbohydrate Metabolism	00630	Glyoxylate and dicarboxylate metabolism	[PATH:ath00630]	Contig0526	AT5G14780	FAECPM

GO Informations
Locus Name	Go Name	Go Class Descriptions	GO id	Anotations01
AT5G14780	AT5G14780	chloroplast	GO:0009507	chloroplast
AT5G14780	AT5G14780	mitochondrion	GO:0005739	mitochondria
AT5G14780	AT5G14780	thylakoid	GO:0009579	other intracellular components
AT5G14780	AT5G14780	catalytic activity	GO:0003824	other enzyme activity
AT5G14780	AT5G14780	binding	GO:0005488	other binding
AT5G14780	AT5G14780	"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor"	GO:0016616	other enzyme activity
AT5G14780	AT5G14780	response to cadmium ion	GO:0046686	other biological processes
AT5G14780	AT5G14780	cofactor binding	GO:0048037	other binding
AT5G14780	AT5G14780	NAD or NADH binding	GO:0051287	other binding
AT5G14780	AT5G14780	chloroplast	GO:0009507	chloroplast
AT5G14780	AT5G14780	mitochondrion	GO:0005739	mitochondria
AT5G14780	AT5G14780	mitochondrion	GO:0005739	mitochondria
AT5G14780	AT5G14780	response to wounding	GO:0009611	response to stress
AT5G14780	AT5G14780	chloroplast	GO:0009507	chloroplast
AT5G14780	AT5G14780	mitochondrion	GO:0005739	mitochondria
AT5G14780	AT5G14780	thylakoid	GO:0009579	other intracellular components
AT5G14780	AT5G14780	catalytic activity	GO:0003824	other enzyme activity
AT5G14780	AT5G14780	binding	GO:0005488	other binding
AT5G14780	AT5G14780	"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor"	GO:0016616	other enzyme activity
AT5G14780	AT5G14780	response to cadmium ion	GO:0046686	other biological processes
AT5G14780	AT5G14780	cofactor binding	GO:0048037	other binding
AT5G14780	AT5G14780	NAD or NADH binding	GO:0051287	other binding
AT5G14780	AT5G14780	chloroplast	GO:0009507	chloroplast
AT5G14780	AT5G14780	mitochondrion	GO:0005739	mitochondria
AT5G14780	AT5G14780	mitochondrion	GO:0005739	mitochondria
AT5G14780	AT5G14780	response to wounding	GO:0009611	response to stress

Gene Network Informations
Gene Network	Interact with..
Contig0526[interact with..]	Not found!