Contig View

Back [Phalaenopsis Transcriptome]

Library Name: Contig Lists:

Contig Information:

Project Name	Query Name	Length of query
FAECPM	Contig0325	1182

Contig Map:

(ProjectName=FAECPM SequenceName=Contig0325):
FAECPM033_A11_PDNR-F:
FAECPM006_B12_PDNRF:
FAECPM011_B10_PDNRF:
FAECPM030_C11_PDNR-F:
FAECPM020_E03_PDNR-F:

Sequences View:[Contig0325](Contig Seguence)

1182 bases 
GAATGCAACTCAAATATTTCATATCATGGCAGAAGTGCCACATCACTAAGCACATTAATGTAGTCTTTTCATTCACCAAACAAATTGCTTTCGTTGGAAAAATTACGATGCTCGCCACTCATCATTCGCACAGTATTGCCCTCTTTATAAAGTCACCGATGGTCCAGCTCCCGTCGAGCATACAGAAAAGAAGTGTGGCCTAAGCCCAGCGGCTCACCCGATGGCCTCTATGCTCCTCTGCATCCTAGTCTCTGCTCTCGCTTTCTTCTCCTGGCCGGCGCCGGCACTGTCGCAGGGCCTCCCGCCCATAGTAAACGGGCTCTCCTTCTCATTCTATAAGGCAAGCTGTCCTAAGCTGGACTCCATTGTCCGAGACTTTCTTAAAAAGCAGTTCAAGAAAGACATCGGGCTTGCTGCTGCGCTTCTGCGCGTACATTTCCATGACTGCTTTGTCCAGGGGTGCGACGGGTCGGTGCTATTGGACGGATCGGCCAGCGGTCCCAGTGAGAAGAACGCGCCGCCAAACTTGACACTGAGGCCGGAGGCCTTCAAGGCCATTAACGACATCCGAGCTCTGATCGACAGCAAATGCGGCAGCGTGGTCTCCTGCGCCGACGTGCTTGCCCTTGCAGCTCGGGACTCCGTTTCCTTGTCAGGCGGTCCCCGCTACAAAGTCCCGCTCGGCCGCCGCGACGGTCTAACCTTCGCCACACGCAACGCCACGCTCGCCAGCCTTCCGGCTCCGACCTTCAACGTCTCCGCCATCCTTCCCGTCCTTGCACGTATCAATCTCGACGCCGCCGACCTCGTCGCCCTCTCCGGCGGCCACACCATCGGCCGCGGCCACTGTGCCTCCTTCTCCAACCGCATCTTCCCTTCTCGTGACCCTACCATGGACCAAACCTTTTTCAACAACCTCCGCCGAACTTGCCCGTCTTCGAACTCCACCAACACGACCGTGCTCGACATCCGCAGCCCCAATGACTTCGACAACAAGTACTACGTGGATTTAATGAACAGACAGGGGCTTTTTTACATCAGATGAGGATTTGTATATGGATTCGAGGACGAGGCAAACGGTTTTAGATTTTGCGCTGAATCAATCGCTTTTCTTTGAGAAGTTTTCATTTTCGATGGTGAAGATGGGGCAGCTGAGCGTGCTGACTGGTGGAAATGGGGAGA

Sequences View:[Contig0325](Singleton Sequence)

Contig0325 1182  bases 
GAATGCAACTCAAATATTTCATATCATGGCAGAAGTGCCACATCACTAAGCACATTAATGTAGTCTTTTCATTCACCAAACAAATTGCTTTCGTTGGAAAAATTACGATGCTCGCCACTCATCATTCGCACAGTATTGCCCTCTTTATAAAGTCACCGATGGTCCAGCTCCCGTCGAGCATACAGAAAAGAAGTGTGGCCTAAGCCCAGCGGCTCACCCGATGGCCTCTATGCTCCTCTGCATCCTAGTCTCTGCTCTCGCTTTCTTCTCCTGGCCGGCGCCGGCACTGTCGCAGGGCCTCCCGCCCATAGTAAACGGGCTCTCCTTCTCATTCTATAAGGCAAGCTGTCCTAAGCTGGACTCCATTGTCCGAGACTTTCTTAAAAAGCAGTTCAAGAAAGACATCGGGCTTGCTGCTGCGCTTCTGCGCGTACATTTCCATGACTGCTTTGTCCAGGGGTGCGACGGGTCGGTGCTATTGGACGGATCGGCCAGCGGTCCCAGTGAGAAGAACGCGCCGCCAAACTTGACACTGAGGCCGGAGGCCTTCAAGGCCATTAACGACATCCGAGCTCTGATCGACAGCAAATGCGGCAGCGTGGTCTCCTGCGCCGACGTGCTTGCCCTTGCAGCTCGGGACTCCGTTTCCTTGTCAGGCGGTCCCCGCTACAAAGTCCCGCTCGGCCGCCGCGACGGTCTAACCTTCGCCACACGCAACGCCACGCTCGCCAGCCTTCCGGCTCCGACCTTCAACGTCTCCGCCATCCTTCCCGTCCTTGCACGTATCAATCTCGACGCCGCCGACCTCGTCGCCCTCTCCGGCGGCCACACCATCGGCCGCGGCCACTGTGCCTCCTTCTCCAACCGCATCTTCCCTTCTCGTGACCCTACCATGGACCAAACCTTTTTCAACAACCTCCGCCGAACTTGCCCGTCTTCGAACTCCACCAACACGACCGTGCTCGACATCCGCAGCCCCAATGACTTCGACAACAAGTACTACGTGGATTTAATGAACAGACAGGGGCTTTTTTACATCAGATGAGGATTTGTATATGGATTCGAGGACGAGGCAAACGGTTTTAGATTTTGCGCTGAATCAATCGCTTTTCTTTGAGAAGTTTTCATTTTCGATGGTGAAGATGGGGCAGCTGAGCGTGCTGACTGGTGGAAATGGGGAGA

Contig Annotation:

GenBank	Accession number (Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
emb	CAP72490.1	catharanthus roseus peroxidase 2b	Catharanthus roseus	365	364 bits (935)	e-115	177/269 (65%)	215/269 (79%)	+2

KEGG Pathway	GO
Contig0325[2 Pathway]	Contig0325[40 GoTerm]

Pathway Informations
First-level terms	Second-level terms	KEGG pathway Num	KEGG pathway Name	KEGG pathway Description	contig Name	locusName	project Name
Metabolism	Amino Acid Metabolism	00360	Phenylalanine metabolism	[PATH:ath00360]	Contig0325	AT1G71695	FAECPM
Metabolism	Biosynthesis of Other Secondary Metabolites	00940	Phenylpropanoid biosynthesis	[PATH:ath00940]	Contig0325	AT1G71695	FAECPM

GO Informations
Locus Name	Go Name	Go Class Descriptions	GO id	Anotations01
AT1G71695	AT1G71695	plant-type cell wall	GO:0009505	cell wall
AT1G71695	AT1G71695	peroxidase activity	GO:0004601	other enzyme activity
AT1G71695	AT1G71695	cell wall	GO:0005618	cell wall
AT1G71695	AT1G71695	membrane	GO:0016020	other membranes
AT1G71695	AT1G71695	vacuole	GO:0005773	other cytoplasmic components
AT1G71695	AT1G71695	vacuole	GO:0005773	other intracellular components
AT1G71695	AT1G71695	peroxidase activity	GO:0004601	other enzyme activity
AT1G71695	AT1G71695	response to oxidative stress	GO:0006979	response to stress
AT1G71695	AT1G71695	heme binding	GO:0020037	other binding
AT1G71695	AT1G71695	oxidation-reduction process	GO:0055114	other metabolic processes
AT1G71695	AT1G71695	plant-type cell wall	GO:0009505	cell wall
AT1G71695	AT1G71695	peroxidase activity	GO:0004601	other enzyme activity
AT1G71695	AT1G71695	cell wall	GO:0005618	cell wall
AT1G71695	AT1G71695	membrane	GO:0016020	other membranes
AT1G71695	AT1G71695	vacuole	GO:0005773	other cytoplasmic components
AT1G71695	AT1G71695	vacuole	GO:0005773	other intracellular components
AT1G71695	AT1G71695	peroxidase activity	GO:0004601	other enzyme activity
AT1G71695	AT1G71695	response to oxidative stress	GO:0006979	response to stress
AT1G71695	AT1G71695	heme binding	GO:0020037	other binding
AT1G71695	AT1G71695	oxidation-reduction process	GO:0055114	other metabolic processes
AT1G71695	AT1G71695	plant-type cell wall	GO:0009505	cell wall
AT1G71695	AT1G71695	peroxidase activity	GO:0004601	other enzyme activity
AT1G71695	AT1G71695	cell wall	GO:0005618	cell wall
AT1G71695	AT1G71695	membrane	GO:0016020	other membranes
AT1G71695	AT1G71695	vacuole	GO:0005773	other cytoplasmic components
AT1G71695	AT1G71695	vacuole	GO:0005773	other intracellular components
AT1G71695	AT1G71695	peroxidase activity	GO:0004601	other enzyme activity
AT1G71695	AT1G71695	response to oxidative stress	GO:0006979	response to stress
AT1G71695	AT1G71695	heme binding	GO:0020037	other binding
AT1G71695	AT1G71695	oxidation-reduction process	GO:0055114	other metabolic processes
AT1G71695	AT1G71695	plant-type cell wall	GO:0009505	cell wall
AT1G71695	AT1G71695	peroxidase activity	GO:0004601	other enzyme activity
AT1G71695	AT1G71695	cell wall	GO:0005618	cell wall
AT1G71695	AT1G71695	membrane	GO:0016020	other membranes
AT1G71695	AT1G71695	vacuole	GO:0005773	other cytoplasmic components
AT1G71695	AT1G71695	vacuole	GO:0005773	other intracellular components
AT1G71695	AT1G71695	peroxidase activity	GO:0004601	other enzyme activity
AT1G71695	AT1G71695	response to oxidative stress	GO:0006979	response to stress
AT1G71695	AT1G71695	heme binding	GO:0020037	other binding
AT1G71695	AT1G71695	oxidation-reduction process	GO:0055114	other metabolic processes

Gene Network Informations
Gene Network	Interact with..
Contig0325[interact with..]	Not found!