Contig View

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Library Name: Contig Lists:

Contig Information:

Project Name	Query Name	Length of query
454	contig01787	708

Contig Map:

(ProjectName=454
SequenceName=NoContigFind):

Sequences View:[NoContigFind](Contig Seguence)

Sequences View:[contig01787](Singleton Sequence)

Contig Annotation:

GenBank	Accession number (Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
ref	XP_002313757.1	predicted protein	Populus trichocarpa	116	201 bits (510)	7e-50	91/116 (78%)	102/116 (87%)	+3

KEGG Pathway	GO
NoContigFind[1 Pathway]	NoContigFind[24 GoTerm]

Pathway Informations
First-level terms	Second-level terms	KEGG pathway Num	KEGG pathway Name	KEGG pathway Description	contig Name	locusName	project Name
Metabolism	Energy Metabolism	00190	Oxidative phosphorylation	[PATH:ath00190]	contig01787	AT4G34700	454

GO Informations
Locus Name	Go Name	Go Class Descriptions	GO id	Anotations01
AT4G34700	AT4G34700	plasma membrane	GO:0005886	plasma membrane
AT4G34700	AT4G34700	mitochondrion	GO:0005739	mitochondria
AT4G34700	AT4G34700	catalytic activity	GO:0003824	other enzyme activity
AT4G34700	AT4G34700	carbohydrate metabolic process	GO:0005975	other metabolic processes
AT4G34700	AT4G34700	photorespiration	GO:0009853	other cellular processes
AT4G34700	AT4G34700	photorespiration	GO:0009853	other metabolic processes
AT4G34700	AT4G34700	respiratory chain complex I	GO:0045271	other membranes
AT4G34700	AT4G34700	respiratory chain complex I	GO:0045271	other intracellular components
AT4G34700	AT4G34700	mitochondrial membrane	GO:0031966	mitochondria
AT4G34700	AT4G34700	mitochondrial membrane	GO:0031966	other membranes
AT4G34700	AT4G34700	mitochondrial membrane	GO:0031966	other cytoplasmic components
AT4G34700	AT4G34700	mitochondrial membrane	GO:0031966	other intracellular components
AT4G34700	AT4G34700	plasma membrane	GO:0005886	plasma membrane
AT4G34700	AT4G34700	mitochondrion	GO:0005739	mitochondria
AT4G34700	AT4G34700	catalytic activity	GO:0003824	other enzyme activity
AT4G34700	AT4G34700	carbohydrate metabolic process	GO:0005975	other metabolic processes
AT4G34700	AT4G34700	photorespiration	GO:0009853	other cellular processes
AT4G34700	AT4G34700	photorespiration	GO:0009853	other metabolic processes
AT4G34700	AT4G34700	respiratory chain complex I	GO:0045271	other membranes
AT4G34700	AT4G34700	respiratory chain complex I	GO:0045271	other intracellular components
AT4G34700	AT4G34700	mitochondrial membrane	GO:0031966	mitochondria
AT4G34700	AT4G34700	mitochondrial membrane	GO:0031966	other membranes
AT4G34700	AT4G34700	mitochondrial membrane	GO:0031966	other cytoplasmic components
AT4G34700	AT4G34700	mitochondrial membrane	GO:0031966	other intracellular components

Gene Network Informations
Gene Network	Interact with..
contig01787[interact with..]	contig02052 FXQQ4OB01DCDZW

Query Name	Length of query	GenBank	Accession number(Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
contig02052	276	ref	NP_001045413.1	Os01g0951400	Oryza sativa (japonica cultivar-group)	475	93.2 bits (230)	8e-18	50/91 (54%)	61/91 (67%)	-3
FXQQ4OB01DCDZW	247	ref	XP_002297746.1	predicted protein	Populus trichocarpa	475	69.3 bits (168)	1e-10	31/39 (79%)	35/39 (89%)	+1