Contig View

Back [Phalaenopsis Transcriptome]

Library Name: Contig Lists:

Contig Information:

Project Name	Query Name	Length of query
454	FXQQ4OB02F8VMN	248

Contig Map:

(ProjectName=454
SequenceName=NoContigFind):

Sequences View:[NoContigFind](Contig Seguence)

Sequences View:[FXQQ4OB02F8VMN](Singleton Sequence)

Contig Annotation:

GenBank	Accession number (Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
ref	NP_001061575.1	Os08g0335000	Oryza sativa (japonica cultivar-group)	1130	147 bits (372)	3e-34	70/82 (85%)	79/82 (96%)	+3

KEGG Pathway	GO
NoContigFind[1 Pathway]	NoContigFind[18 GoTerm]

Pathway Informations
First-level terms	Second-level terms	KEGG pathway Num	KEGG pathway Name	KEGG pathway Description	contig Name	locusName	project Name
Genetic Information Processing	Transcription	03040	Spliceosome	[PATH:ath03040]	FXQQ4OB02F8VMN	AT1G32490	454

GO Informations
Locus Name	Go Name	Go Class Descriptions	GO id	Anotations01
AT1G32490	AT1G32490	ATP binding	GO:0005524	nucleotide binding
AT1G32490	AT1G32490	ATP-dependent helicase activity	GO:0008026	hydrolase activity
AT1G32490	AT1G32490	ATP-dependent helicase activity	GO:0008026	other enzyme activity
AT1G32490	AT1G32490	helicase activity	GO:0004386	other enzyme activity
AT1G32490	AT1G32490	nucleic acid binding	GO:0003676	nucleic acid binding
AT1G32490	AT1G32490	endomembrane system	GO:0012505	other cellular components
AT1G32490	AT1G32490	ATP-dependent RNA helicase activity	GO:0004004	hydrolase activity
AT1G32490	AT1G32490	ATP-dependent RNA helicase activity	GO:0004004	other enzyme activity
AT1G32490	AT1G32490	RNA splicing	GO:0008380	other cellular processes
AT1G32490	AT1G32490	RNA splicing	GO:0008380	other metabolic processes
AT1G32490	AT1G32490	embryo development ending in seed dormancy	GO:0009793	developmental processes
AT1G32490	AT1G32490	posttranscriptional gene silencing by RNA	GO:0035194	other cellular processes
AT1G32490	AT1G32490	ATP binding	GO:0005524	nucleotide binding
AT1G32490	AT1G32490	ATP-dependent helicase activity	GO:0008026	hydrolase activity
AT1G32490	AT1G32490	ATP-dependent helicase activity	GO:0008026	other enzyme activity
AT1G32490	AT1G32490	helicase activity	GO:0004386	other enzyme activity
AT1G32490	AT1G32490	nucleic acid binding	GO:0003676	nucleic acid binding
AT1G32490	AT1G32490	endomembrane system	GO:0012505	other cellular components

Gene Network Informations
Gene Network	Interact with..
FXQQ4OB02F8VMN[interact with..]	Not found!