Back [Phalaenopsis Transcriptome]
Library Name:       Contig Lists:     
Contig Information:
Project NameQuery NameLength of query
FPTEVCPMFPTEVCPM062_A08_PDNR-F590

Contig Map:
(ProjectName=FPTEVCPM
SequenceName=NoContigFind):

Sequences View:[NoContigFind](Contig Seguence)


Sequences View:[FPTEVCPM062_A08_PDNR-F](Singleton Sequence)

Contig Annotation:
GenBankAccession number
(Best hits in the GenBank)
AnnotationSpeciesLength of homologous protein(Amino Acid)ScoreExpect valueIdentitiessimilarityFrame
refXP_002267800.1 PREDICTED: hypothetical protein Vitis vinifera51108 bits (270)3e-2249/51 (96%)49/51 (96%) +3

KEGG PathwayGO
NoContigFind[3 Pathway]NoContigFind[44 GoTerm]
Pathway Informations
First-level termsSecond-level termsKEGG pathway NumKEGG pathway NameKEGG pathway Description contig NamelocusNameproject Name
Genetic Information ProcessingTranscription03020RNA polymerase[PATH:ath03020]FPTEVCPM062_A08_PDNR-FAT5G41010FPTEVCPM
MetabolismNucleotide Metabolism00230Purine metabolism[PATH:ath00230]FPTEVCPM062_A08_PDNR-FAT5G41010FPTEVCPM
MetabolismNucleotide Metabolism00240Pyrimidine metabolism[PATH:ath00240]FPTEVCPM062_A08_PDNR-FAT5G41010FPTEVCPM

GO Informations
Locus NameGo NameGo Class DescriptionsGO idAnotations01
AT5G41010AT5G41010DNA bindingGO:0003677DNA or RNA binding
AT5G41010AT5G41010DNA-directed RNA polymerase activityGO:0003899transferase activity
AT5G41010AT5G41010transcriptionGO:0006350transcription
AT5G41010AT5G41010"DNA-directed RNA polymerase II, core complex"GO:0005665nucleus
AT5G41010AT5G41010"DNA-directed RNA polymerase II, core complex"GO:0005665other intracellular components
AT5G41010AT5G41010nucleusGO:0005634nucleus
AT5G41010AT5G41010DNA bindingGO:0003677DNA or RNA binding
AT5G41010AT5G41010DNA-directed RNA polymerase activityGO:0003899transferase activity
AT5G41010AT5G41010transcriptionGO:0006350transcription
AT5G41010AT5G41010DNA-directed RNA polymerase IV complexGO:0000418nucleus
AT5G41010AT5G41010DNA-directed RNA polymerase IV complexGO:0000418other intracellular components
AT5G41010AT5G41010DNA bindingGO:0003677DNA or RNA binding
AT5G41010AT5G41010DNA-directed RNA polymerase activityGO:0003899transferase activity
AT5G41010AT5G41010transcriptionGO:0006350transcription
AT5G41010AT5G41010"DNA-directed RNA polymerase II, core complex"GO:0005665nucleus
AT5G41010AT5G41010"DNA-directed RNA polymerase II, core complex"GO:0005665other intracellular components
AT5G41010AT5G41010nucleusGO:0005634nucleus
AT5G41010AT5G41010DNA bindingGO:0003677DNA or RNA binding
AT5G41010AT5G41010DNA-directed RNA polymerase activityGO:0003899transferase activity
AT5G41010AT5G41010transcriptionGO:0006350transcription
AT5G41010AT5G41010DNA-directed RNA polymerase IV complexGO:0000418nucleus
AT5G41010AT5G41010DNA-directed RNA polymerase IV complexGO:0000418other intracellular components
AT5G41010AT5G41010DNA bindingGO:0003677DNA or RNA binding
AT5G41010AT5G41010DNA-directed RNA polymerase activityGO:0003899transferase activity
AT5G41010AT5G41010transcriptionGO:0006350transcription
AT5G41010AT5G41010"DNA-directed RNA polymerase II, core complex"GO:0005665nucleus
AT5G41010AT5G41010"DNA-directed RNA polymerase II, core complex"GO:0005665other intracellular components
AT5G41010AT5G41010nucleusGO:0005634nucleus
AT5G41010AT5G41010DNA bindingGO:0003677DNA or RNA binding
AT5G41010AT5G41010DNA-directed RNA polymerase activityGO:0003899transferase activity
AT5G41010AT5G41010transcriptionGO:0006350transcription
AT5G41010AT5G41010DNA-directed RNA polymerase IV complexGO:0000418nucleus
AT5G41010AT5G41010DNA-directed RNA polymerase IV complexGO:0000418other intracellular components
AT5G41010AT5G41010DNA bindingGO:0003677DNA or RNA binding
AT5G41010AT5G41010DNA-directed RNA polymerase activityGO:0003899transferase activity
AT5G41010AT5G41010transcriptionGO:0006350transcription
AT5G41010AT5G41010"DNA-directed RNA polymerase II, core complex"GO:0005665nucleus
AT5G41010AT5G41010"DNA-directed RNA polymerase II, core complex"GO:0005665other intracellular components
AT5G41010AT5G41010nucleusGO:0005634nucleus
AT5G41010AT5G41010DNA bindingGO:0003677DNA or RNA binding
AT5G41010AT5G41010DNA-directed RNA polymerase activityGO:0003899transferase activity
AT5G41010AT5G41010transcriptionGO:0006350transcription
AT5G41010AT5G41010DNA-directed RNA polymerase IV complexGO:0000418nucleus
AT5G41010AT5G41010DNA-directed RNA polymerase IV complexGO:0000418other intracellular components

Gene Network Informations
Gene NetworkInteract with..
FPTEVCPM062_A08_PDNR-F[interact with..]Contig1227
FPTEVCPM062_A08_PDNR-F
Query NameLength of queryGenBankAccession number(Best hits in the GenBank)AnnotationSpeciesLength of homologous protein(Amino Acid)ScoreExpect valueIdentitiessimilarityFrame
Contig12271210refXP_002441353.1 hypothetical protein SORBIDRAFT_09g025080 Sorghum bicolor267396 bits (1018)e-108197/265 (74%)221/265 (83%), Gaps = 7/265 (2%) +2
FPTEVCPM062_A08_PDNR-F590refXP_002267800.1 PREDICTED: hypothetical protein Vitis vinifera51108 bits (270)3e-2249/51 (96%)49/51 (96%) +3