Back [Phalaenopsis Transcriptome]
Library Name:       Contig Lists:     
Contig Information:
Project NameQuery NameLength of query
FEVCPFEVCPS016_F03_PDNR-F793

Contig Map:
(ProjectName=FEVCP
SequenceName=NoContigFind):

Sequences View:[NoContigFind](Contig Seguence)


Sequences View:[FEVCPS016_F03_PDNR-F](Singleton Sequence)

Contig Annotation:
GenBankAccession number
(Best hits in the GenBank)
AnnotationSpeciesLength of homologous protein(Amino Acid)ScoreExpect valueIdentitiessimilarityFrame
refNP_568589.1 UBC4 (UBIQUITIN CONJUGATING ENZYME 4); ubiquitin-protein ligase Arabidopsis thaliana187288 bits (738)3e-76134/148 (90%)142/148 (95%) +1

KEGG PathwayGO
NoContigFind[2 Pathway]NoContigFind[20 GoTerm]
Pathway Informations
First-level termsSecond-level termsKEGG pathway NumKEGG pathway NameKEGG pathway Description contig NamelocusNameproject Name
Genetic Information ProcessingFolding, Sorting and Degradation04141Protein processing in endoplasmic reticulum[PATH:ath04141]FEVCPS016_F03_PDNR-FAT5G41340FEVCP
Genetic Information ProcessingFolding, Sorting and Degradation04120Ubiquitin mediated proteolysis[PATH:ath04120]FEVCPS016_F03_PDNR-FAT5G41340FEVCP

GO Informations
Locus NameGo NameGo Class DescriptionsGO idAnotations01
AT5G41340AT5G41340cellular_componentGO:0005575unknown cellular components
AT5G41340AT5G41340ubiquitin-protein ligase activityGO:0004842other enzyme activity
AT5G41340AT5G41340ubiquitin-protein ligase activityGO:0004842other enzyme activity
AT5G41340AT5G41340ubiquitin-protein ligase activityGO:0004842other enzyme activity
AT5G41340AT5G41340ubiquitin-dependent protein catabolic processGO:0006511protein metabolism
AT5G41340AT5G41340ubiquitin-dependent protein catabolic processGO:0006511other cellular processes
AT5G41340AT5G41340ubiquitin-dependent protein catabolic processGO:0006511other metabolic processes
AT5G41340AT5G41340ubiquitin-dependent protein catabolic processGO:0006511protein metabolism
AT5G41340AT5G41340ubiquitin-dependent protein catabolic processGO:0006511other cellular processes
AT5G41340AT5G41340ubiquitin-dependent protein catabolic processGO:0006511other metabolic processes
AT5G41340AT5G41340cellular_componentGO:0005575unknown cellular components
AT5G41340AT5G41340ubiquitin-protein ligase activityGO:0004842other enzyme activity
AT5G41340AT5G41340ubiquitin-protein ligase activityGO:0004842other enzyme activity
AT5G41340AT5G41340ubiquitin-protein ligase activityGO:0004842other enzyme activity
AT5G41340AT5G41340ubiquitin-dependent protein catabolic processGO:0006511protein metabolism
AT5G41340AT5G41340ubiquitin-dependent protein catabolic processGO:0006511other cellular processes
AT5G41340AT5G41340ubiquitin-dependent protein catabolic processGO:0006511other metabolic processes
AT5G41340AT5G41340ubiquitin-dependent protein catabolic processGO:0006511protein metabolism
AT5G41340AT5G41340ubiquitin-dependent protein catabolic processGO:0006511other cellular processes
AT5G41340AT5G41340ubiquitin-dependent protein catabolic processGO:0006511other metabolic processes

Gene Network Informations
Gene NetworkInteract with..
FEVCPS016_F03_PDNR-F[interact with..]FEVCPS019_G01_PDNR-F
Query NameLength of queryGenBankAccession number(Best hits in the GenBank)AnnotationSpeciesLength of homologous protein(Amino Acid)ScoreExpect valueIdentitiessimilarityFrame
FEVCPS019_G01_PDNR-F764refXP_002311788.1 predicted protein Populus trichocarpa393326 bits (835)2e-87153/175 (87%)169/175 (96%) +3