Back [Phalaenopsis Transcriptome]
Library Name:       Contig Lists:     
Contig Information:
Project NameQuery NameLength of query
FAECPMFAECPM038_F03_PDNR-F1054

Contig Map:
(ProjectName=FAECPM
SequenceName=NoContigFind):

Sequences View:[NoContigFind](Contig Seguence)


Sequences View:[FAECPM038_F03_PDNR-F](Singleton Sequence)

Contig Annotation:
GenBankAccession number
(Best hits in the GenBank)
AnnotationSpeciesLength of homologous protein(Amino Acid)ScoreExpect valueIdentitiessimilarityFrame
gbABK56834.1 RPS3 Cymbidium hybrid cultivar261446 bits (1147)e-123220/234 (94%)228/234 (97%) +2

KEGG PathwayGO
NoContigFind[1 Pathway]NoContigFind[26 GoTerm]
Pathway Informations
First-level termsSecond-level termsKEGG pathway NumKEGG pathway NameKEGG pathway Description contig NamelocusNameproject Name
Genetic Information ProcessingTranslation03010Ribosome[PATH:ath03010]FAECPM038_F03_PDNR-FAT3G04840FAECPM

GO Informations
Locus NameGo NameGo Class DescriptionsGO idAnotations01
AT3G04840AT3G04840chloroplastGO:0009507chloroplast
AT3G04840AT3G04840plasma membraneGO:0005886plasma membrane
AT3G04840AT3G04840cytosolic ribosomeGO:0022626cytosol
AT3G04840AT3G04840cytosolic ribosomeGO:0022626cytosol
AT3G04840AT3G04840cytosolic ribosomeGO:0022626ribosome
AT3G04840AT3G04840cytosolic ribosomeGO:0022626ribosome
AT3G04840AT3G04840cytosolic ribosomeGO:0022626other cytoplasmic components
AT3G04840AT3G04840cytosolic ribosomeGO:0022626other cytoplasmic components
AT3G04840AT3G04840cytosolic ribosomeGO:0022626other intracellular components
AT3G04840AT3G04840cytosolic ribosomeGO:0022626other intracellular components
AT3G04840AT3G04840structural constituent of ribosomeGO:0003735structural molecule activity
AT3G04840AT3G04840translationGO:0006412protein metabolism
AT3G04840AT3G04840translationGO:0006412other cellular processes
AT3G04840AT3G04840translationGO:0006412other metabolic processes
AT3G04840AT3G04840cytosolic ribosomeGO:0022626cytosol
AT3G04840AT3G04840cytosolic ribosomeGO:0022626ribosome
AT3G04840AT3G04840cytosolic ribosomeGO:0022626other cytoplasmic components
AT3G04840AT3G04840cytosolic ribosomeGO:0022626other intracellular components
AT3G04840AT3G04840cytosolic small ribosomal subunitGO:0022627cytosol
AT3G04840AT3G04840cytosolic small ribosomal subunitGO:0022627ribosome
AT3G04840AT3G04840cytosolic small ribosomal subunitGO:0022627other cytoplasmic components
AT3G04840AT3G04840cytosolic small ribosomal subunitGO:0022627other intracellular components
AT3G04840AT3G04840cytosolic small ribosomal subunitGO:0022627cytosol
AT3G04840AT3G04840cytosolic small ribosomal subunitGO:0022627ribosome
AT3G04840AT3G04840cytosolic small ribosomal subunitGO:0022627other cytoplasmic components
AT3G04840AT3G04840cytosolic small ribosomal subunitGO:0022627other intracellular components

Gene Network Informations
Gene NetworkInteract with..
FAECPM038_F03_PDNR-F[interact with..]FAECPM035_C03_PDNR-F
Query NameLength of queryGenBankAccession number(Best hits in the GenBank)AnnotationSpeciesLength of homologous protein(Amino Acid)ScoreExpect valueIdentitiessimilarityFrame
FAECPM035_C03_PDNR-F351gbABK56834.1 RPS3 Cymbidium hybrid cultivar26194.4 bits (233)4e-1844/47 (93%)45/47 (95%) +1