Home   [Orchid Unigene Database]
Library Name:       Contig Lists:  
Contig Information:
Library NameQuery NameLength of query
OrchidUnigeneConsensusfromContig1030_Average_coverage__2.63869


ConsensusfromContig1030_Average_coverage__[Green Color:forward,Red Color:Reverse]
LN:869CGAGGCACCTTTCTATACACTCGGTCCCCTGACAACTGATATTGCTCCTGGATATGATCATATTACCTCAGCCATTGGTGCAGCCAACATTGGAGCTCTTGGCACTGCACTTCTTTGTTATGTTACACCTAAAGAACATCTTGGGCTGCCAAATCGTGATGATGTGAAAGCTGGTGTTATATCATACAAAATAGCTGCCCATGCTGCTGATTTGGCAAAATGTCATCCCCATGCACAAGCCTGGGATGATGCCCTAAGCAAGGCACGCTTTGAGTTTAGATGGGTTGATCAATTTGCTTTATCATTGGATCCAATGACTGCGATGACCTTCCATGATGAGACACTTCCCTCTGAGGGTGCCAAGGTTGCACATTTCTGTTCAATGTGTGGACCTAAGTTCTGCTCTATGAAGATTACAGAAGATGTTCGCAAATATGCTAATGAGCATGGGTATGGAACTCCAGAGGAAGCTTTGAAGCAGGGCATGGAAGCTATGAGTGTTGAGTTTCTTGCTGCCAGGAAAACTATCAGTGGAGAGCAGCATGGTGAAGTTGGTGGGGAGATCTATGTTCCTGAAAGCTATGCCATACGCCGGTAAAAGGAGCTTATTTGCATTTTCGTATTGCCAGAAGCTTGAAAATGACTCCAATTGGCTAAAACAGTTGGCATTTCCTATTGGGCCTATGTAAGTCGATATTATGCTAAATAATGCAAAACATGTTTTGAAACATGTTTTGCTTTGTTCTGTTTGTAAGTCGATATTATACTAAATAGATATTATGCTAAATAATGCAAAACATGTTTTGCTTTGTTCTATATGTAAGTCGATATTATGCTAAAAAATGCAAAACATGTTTTGCTTTGTTCTG
FEVCPContig[0770]CGAGGCACCTTTCTATACACTCGGTCCCCTGACAACTGATATTGCTCCTGGATATGATCATATTACCTCAGCCATTGGTGCAGCCAACATTGGAGCTCTTGGCACTGCACTTCTTTGTTATGTTACACCTAAAGAACATCTTGGGCTGCCAAATCGTGATGATGTGAAAGCTGGTGTTATATCATACAAAATAGCTGCCCATGCTGCTGATTTGGCAAAATGTCATCCCCATGCACAAGCCTGGGATGATGCCCTAAGCAAGGCACGCTTTGAGTTTAGATGGGTTGATCAATTTGCTTTATCATTGGATCCAATGACTGCGATGACCTTCCATGATGAGACACTTCCCTCTGAGGGTGCCAAGGTTGCACATTTCTGTTCAATGTGTGGACCTAAGTTCTGCTCTATGAAGATTACAGAAGATGTTCGCAAATATGCTAATGAGCATGGGTATGGAACTCCAGAGGAAGCTTTGAAGCAGGGCATGGAAGCTATGAGTGTTGAGTTTCTTGCTGCCAGGAAAACTATCAGTGGAGAGCAGCATGGTGAAGTTGGTGGGGAGATCTATGTTCCTGAAAGCTATGCCATACGCCGGTAAAAGGAGCTTATTTGCATTTTCGTATTGCCAGAAGCTTGAAAATGACTCCAATTGGCTAAAACAGTTGGCATTTCCTATTGGGCCTATGTAAATCGATATTATGCTAAATAATGCAAAACATGTTTTGAAACATGTTTTGCTTTGTTCTGTTTGTAAGTCGATATTATACTAAATAGATATTATGCTAAATAATGCAAAACATGTTTTTGCTTTGTTCTATATGTAAGTCGATATTATGCTAAAAAATGCAAAACATGTTTTTGCTTTGTTCTGATGGGTTGTGTTTGTTTAGTTTTG
FPTEVCPM016_F08_PDNR-FGCCATTGGTGCAGCCAACATTGGAGCTCTTGGCACTGCACTTCTTTGTTATGTTACACCTAAAGAACATCTTGGGCTGCCAAATCGTGATGATGTGAAAGCTGGTGTTATATCATACAAAATAGCTGCCCATGCTGCTGATTTGGCAAAATGTCATCCCCATGCACAAGCCTGGGATGATGCCCTAAGCAAGGCACGCTTTGAGTTTAGATGGGTTGATCAATTTGCTTTATCATTGGATCCAATGACTGCGATGACCTTCCATGATGAGACACTTCCCTCTGGGGGTGCCAAGGTTGCACATTTCTGTTCAATGTGTGGACCTAAGTTCTGCTCTATGAAGATTACAGAAGATGTTCGCAAATATGCTAATGAGCATGGGTATGGAACTCCAGAGGAAGCTTTGAAGCAGGGCATGGAAGCTATGAGCGTTGAGTTTCTTGCTGCCAGGAAAACTATCAGTGGAGAGCAGCATGGTGAAGTTGGTGGGGAGATCTATGTTCCTGAAAGCTATGCCATACGCCGGTAAAAGGAGCTTATTTGCATTTTCGTATTGCCAGAAGCTTGAAAATGACTCCAATTGGCTAAAACAGTTGGCATTTCCTATTGGGCCTATGTAAGTCGATATTATGCTAAATAATGCAAAACATGTTTTGAAACATGTTTTGCTTTGTTCTGTTTGTAAGTCGATATTATACTAAATAGATATTATGCTAAATAATGCAAAACATGTTTTGCTTTGTTCTATATGTAAGTCGATATTATGCTAAAAAATGCAAAACATGTTTTGCTTTGTGC
FEVCPS013_A07_PDNRFGGGAAAGCTGGTGTTATATCATACAAAATAGCTGCCCATGCTGCTGATTTGGCAAAATGTCATCCCTATGCACAAGCCTGGGATGATGCCCTAAGCAAGGCACGCTTTGAGTTTAGATGGGTTGATCAATTTGCTTTATCATTGGATCCAATGACTGCGATGACCTTCCATGATGAGACACTTCCCTCTGAGGGTGCCAAGGTTGCACATTTCTGTTCAATGTGTGGACCTAAGTTCTGCTCTATGAAGATTACAGAAGATGTTCGCAAATATGCTAATGAGCATGGGTATGGAACTCCAGAGGAAGCTTTGAAGCAGGGCATGGAAGCTATGAGTGTTGAGTTTCTTGCTGCCAGGAAAACTATCAGTGGAGAGCAGCATGGTGAAGTTGGTGGGGAGATCTATGTTCCTGAAAGCTATGCCATACGCCGGTAAAAGGAGCTTATTTGCATTTTCGTATTGCCAGAAGCTTGAAAATGACTCCAATTGGCTAAAACAGTTGGCATTTCCTATTGGGCCTATGTAAGTCGATATTATGCTAAATAATGCAAAACATGTTTTGAAACATGTTTTGCTTTGTTCTGTTTGTAAGTCGATATTATACTAAATAGATATTTTGCTTTGTTCTGATGGTTGTGTTTGTTTAGTTTGCTGCAGTAATGAAGCGTTACGAAATGTTAGCTTTTC

Sequences View:[ConsensusfromContig1030_Average_coverage__](Contig Seguence)

Sequences View:[ConsensusfromContig1030_Average_coverage__](Singleton Sequence)


Contig Annotation:
GenBankAccession number
(Best hits in the GenBank)
AnnotationSpeciesLength of homologous protein(Amino Acid)ScoreExpect valueIdentitiessimilarityFrame
gbAAG49550.1AF264021_1 putative thiamine biosythesis protein ThiC Poa secunda643378 bits (970)e-103178/198 (89%)189/198 (95%) +2


KEGG PathwayGO
ConsensusfromContig1030_Average_coverage__[1 Pathway]ConsensusfromContig1030_Average_coverage__[52 GoTerm]

Pathway Informations
First-level termsSecond-level termsKEGG pathway NumKEGG pathway NameKEGG pathway Description contig NamelocusNameproject Name
MetabolismMetabo lism of Cofactors and Vitamins00730Thiamine metabolism[PATH:ath00730]ConsensusfromContig1030AT2G29630OrchidUnigene

GO Informations
Locus NameGo NameGo Class DescriptionsGO idAnotations01
AT2G29630AT2G29630chloroplastGO:0009507chloroplast
AT2G29630AT2G29630chloroplast stromaGO:0009570plastid
AT2G29630AT2G29630chloroplast stromaGO:0009570plastid
AT2G29630AT2G29630chloroplast stromaGO:0009570chloroplast
AT2G29630AT2G29630chloroplast stromaGO:0009570chloroplast
AT2G29630AT2G29630chloroplast stromaGO:0009570other cytoplasmic components
AT2G29630AT2G29630chloroplast stromaGO:0009570other cytoplasmic components
AT2G29630AT2G29630chloroplast stromaGO:0009570other intracellular components
AT2G29630AT2G29630chloroplast stromaGO:0009570other intracellular components
AT2G29630AT2G29630chloroplastGO:0009507chloroplast
AT2G29630AT2G29630chloroplast stromaGO:0009570plastid
AT2G29630AT2G29630chloroplast stromaGO:0009570chloroplast
AT2G29630AT2G29630chloroplast stromaGO:0009570other cytoplasmic components
AT2G29630AT2G29630chloroplast stromaGO:0009570other intracellular components
AT2G29630AT2G29630plastidGO:0009536plastid
AT2G29630AT2G29630catalytic activityGO:0003824other enzyme activity
AT2G29630AT2G29630detection of bacteriumGO:0016045response to abiotic or biotic stimulus
AT2G29630AT2G29630thiamine biosynthetic processGO:0009228other cellular processes
AT2G29630AT2G29630thiamine biosynthetic processGO:0009228other metabolic processes
AT2G29630AT2G29630thiamine biosynthetic processGO:0009228other cellular processes
AT2G29630AT2G29630thiamine biosynthetic processGO:0009228other metabolic processes
AT2G29630AT2G29630thiamine biosynthetic processGO:0009228other cellular processes
AT2G29630AT2G29630thiamine biosynthetic processGO:0009228other metabolic processes
AT2G29630AT2G29630iron-sulfur cluster bindingGO:0051536other binding
AT2G29630AT2G29630response to vitamin B1GO:0010266other biological processes
AT2G29630AT2G29630chloroplastGO:0009507chloroplast
AT2G29630AT2G29630chloroplastGO:0009507chloroplast
AT2G29630AT2G29630chloroplast stromaGO:0009570plastid
AT2G29630AT2G29630chloroplast stromaGO:0009570plastid
AT2G29630AT2G29630chloroplast stromaGO:0009570chloroplast
AT2G29630AT2G29630chloroplast stromaGO:0009570chloroplast
AT2G29630AT2G29630chloroplast stromaGO:0009570other cytoplasmic components
AT2G29630AT2G29630chloroplast stromaGO:0009570other cytoplasmic components
AT2G29630AT2G29630chloroplast stromaGO:0009570other intracellular components
AT2G29630AT2G29630chloroplast stromaGO:0009570other intracellular components
AT2G29630AT2G29630chloroplastGO:0009507chloroplast
AT2G29630AT2G29630chloroplast stromaGO:0009570plastid
AT2G29630AT2G29630chloroplast stromaGO:0009570chloroplast
AT2G29630AT2G29630chloroplast stromaGO:0009570other cytoplasmic components
AT2G29630AT2G29630chloroplast stromaGO:0009570other intracellular components
AT2G29630AT2G29630plastidGO:0009536plastid
AT2G29630AT2G29630catalytic activityGO:0003824other enzyme activity
AT2G29630AT2G29630detection of bacteriumGO:0016045response to abiotic or biotic stimulus
AT2G29630AT2G29630thiamine biosynthetic processGO:0009228other cellular processes
AT2G29630AT2G29630thiamine biosynthetic processGO:0009228other metabolic processes
AT2G29630AT2G29630thiamine biosynthetic processGO:0009228other cellular processes
AT2G29630AT2G29630thiamine biosynthetic processGO:0009228other metabolic processes
AT2G29630AT2G29630thiamine biosynthetic processGO:0009228other cellular processes
AT2G29630AT2G29630thiamine biosynthetic processGO:0009228other metabolic processes
AT2G29630AT2G29630iron-sulfur cluster bindingGO:0051536other binding
AT2G29630AT2G29630response to vitamin B1GO:0010266other biological processes
AT2G29630AT2G29630chloroplastGO:0009507chloroplast

Gene Network Informations
Gene NetworkInteract with..
ConsensusfromContig1030[interact with..]FPEAECP023_C11_PDNR-F
Singletons17716

Query NameLength of queryGenBankAccession number(Best hits in the GenBank)AnnotationSpeciesLength of homologous protein(Amino Acid)ScoreExpect valueIdentitiessimilarityFrame
FPEAECP023_C11_PDNR-F967refNP_001148907.1 molybdopterin biosynthesis CNX3 protein Zea mays220203 bits (517)2e-50113/193 (58%)131/193 (67%) +2
Singletons17716827refNP_001148907.1 molybdopterin biosynthesis CNX3 protein Zea mays220216 bits (551)2e-54121/202 (59%)140/202 (69%), Gaps = 1/202 (0%) -2