Home   [Orchid Unigene Database]
Library Name:       Contig Lists:  
Contig Information:
Library NameQuery NameLength of query
OrchidUnigeneConsensusfromContig1004_Average_coverage__1.97706


ConsensusfromContig1004_Average_coverage__[Green Color:forward,Red Color:Reverse]
LN:706TATTCTGTAGAGAAACTCAGATCAAGGATGAGGTTAAAGGCGTGCTCGAGTTCATTAGTTATGCCTATGAAGTATTCGGATTCACTTATGAGCTAGAGTTATCAACGCGCCCAGAGAAATACTTGGGCGAGATAGAAACGTGGGACAAAGCTGAAGCCGCTCTAAAAGATGCTCTTGAAGAACATGGGAGGCCGTGGCAAATTAATGAAGGGGATGGTGCATTTTATGGACCGAAGATTGACATTGGCGTTTTTGATGCATTGAAGCGAAAATTCCAGTGTGGAACTTTACAGTTGGATTTTCAACTTCCCGAGCGCTTCAAATTGTCATACTCAGCAGAAGACGAAGGCAAGACTGAGCGTCCTGTGATGATACACCGTGCAATTCTTGGATCCGTTGAGCGCATGTTTGCTATTCTGTTGGAACATTACAAAGGGAAATGGCCCTTCTGGCTTAGTCCTCGTCAATCCATCGTTTGTCCAGTATCTGAGAAATCTCAGCCTTATGCACTACAGGTACGTGATCAGATACATGGAGCTGGTTTTCATGTTGATGTCGACACAACCGACAGGAAGATTCAAAAGAAGGTACGAGAAGCTCAGTTGGCGCAGTACAATTACATCTTGGTTGTCGGCGAAGAGGAAGCGAAAACTGGACAGGTGAGCGTCCGTTTGAGAGACAAGGCAGAACATTCGGTAAGAAACAT
contig04945TATTCTGTAGAGAAACTCAGATCAAGGATGAGGTTAAAGGCGTGCTCGAGTTCATTAGTTATGCCTATGAAGTATTCGGATTCACTTATGAGCTAGAGTTATCAACGCGCCCAGAGAAATACTTGGGCGAGATAGAAACGTGGGACAAAGCTGAAGCCGCTCTAAAAGATGCTCTTGAAGAACATGGGAGGCCGTGGCAAATTAATGAAGGGGATGGTGCATTTTATGGACCGAAGATTGACATTGGCGTTTTTGATGCATTGAAGCGAAAATTCCAGTGTGGAACTTTACAGTTGGATTTTCAACTTCCCGAGCGTCTTTCTAAATTTGTCATACTCAGCAGAAGACGAAGGCAAGACTGAGCGTCCTGTGATGATACACCGTGCAATTCTTGGATCCGTTGAGCGCATGTTTGCTATTCTGTTGGAACATTACAAAGGGAAATGGCCCTTCTGGCTTAGTCCTCGTCAATCCATCGTTTGTCCAGTATCTGAGAAATCTCAGCCTTATGCACTACAGGTACGTGATCAGATACATGGAGCTGGTTTTTATGTTGATGTCGACACAACCGACAGGAAGATTCAAAAGAAGGTACGAGAAGCTCAGTTGGCGCAGTACAATTACATCTTGGTTGTCGGCGAAGAGGAAGCGAAAACTGGACAGGTGAGCGTTCGTTTGAGAGACAAGGCAGAACATTCTGTAAGAAACATCGAGGATCTCCTGAAAC
FEIVPContig[2731]GATCAAGGATGAGGTTAAAGGCGTGCTCGAGTTCATTAGTTATGCCTATGAAGTATTCGGATTCACTTATGAGCTAGAGTTATCAACGCGCCCAGAGAAATACTTGGGCGAGATAGAAACGTGGGACAAAGCTGAAGCCGCTCTAAAAGATGCTCTTGAAGAACATGGGAGGCCGTGGCAAATTAATGAAGGGGATGGTGCATTTTATGGACCGAAGATTGACATTGGCGTTTTTGATGCATTGAAGCGAAAATTCCAGTGTGGAACTTTACAGTTGGATTTTCAACTTCCTGAGCGCTTCAAATTGTCATACTCAGCAGAAGACGAAGGCAAGACTGAGCGTCCTGTGATGATACACCGTGCAATTCTTGGATCCGTTGAGCGCATGTTTGCTATTCTGTTGGAACATTACAAAGGGAAATGGCCCTTCTGGCTTAGTCCTCGTCAATCCATTGTTTGTCCAGTATCTGAGAAATCTCAGCCTTATGCATTACAGGTACGTGATCAGATACATGGAGCTGGTTTTCATGTTGATGTCGACACAACCGACAGGAAGATTCAAAAGAAGGTACGAGAAGCTCAGTTGGCGCAGTACAATTACATCTTGGTTGTCGGCGAAGAGGAAGCGAAAACTGGACAGGTGAGCGTCCGTTTGAGAGACAAGGCAGAACATTCGGTAAGAAACATGGAGGATCTCCTGAAACATTTTAGGGAGGAAGCTGCAGCTTACCGCTGATCCGAAATTCTTTATGCACTGCTGTTTTGCTCCCAATATTTATGGTAATTTTGCACCCATGTTTAAATTCTCAGTGCAGCTGATGTTTTAATGTTGTAGCCTACATTTAATCCATACTATTTAAATACTAGGATGAAGGATTCAATTCATATTTATTTGTACTGGTTATCATATAAGGATTAGACTTATTTTTTCC

Sequences View:[ConsensusfromContig1004_Average_coverage__](Contig Seguence)

Sequences View:[ConsensusfromContig1004_Average_coverage__](Singleton Sequence)


Contig Annotation:
GenBankAccession number
(Best hits in the GenBank)
AnnotationSpeciesLength of homologous protein(Amino Acid)ScoreExpect valueIdentitiessimilarityFrame
embCBI39735.1 unnamed protein product Vitis vinifera686391 bits (1004)e-107189/232 (81%)204/232 (87%) +3


KEGG PathwayGO
ConsensusfromContig1004_Average_coverage__[1 Pathway]ConsensusfromContig1004_Average_coverage__[25 GoTerm]

Pathway Informations
First-level termsSecond-level termsKEGG pathway NumKEGG pathway NameKEGG pathway Description contig NamelocusNameproject Name
Genetic Information ProcessingTranslation00970Aminoacyl-tRNA biosynthesis[PATH:ath00970]ConsensusfromContig1004AT5G26830OrchidUnigene

GO Informations
Locus NameGo NameGo Class DescriptionsGO idAnotations01
AT5G26830AT5G26830cell wallGO:0005618cell wall
AT5G26830AT5G26830membraneGO:0016020other membranes
AT5G26830AT5G26830plasma membraneGO:0005886plasma membrane
AT5G26830AT5G26830ATP bindingGO:0005524nucleotide binding
AT5G26830AT5G26830"ligase activity, forming aminoacyl-tRNA and related compounds"GO:0016876other enzyme activity
AT5G26830AT5G26830nucleotide bindingGO:0000166nucleotide binding
AT5G26830AT5G26830aminoacyl-tRNA ligase activityGO:0004812other enzyme activity
AT5G26830AT5G26830threonine-tRNA ligase activityGO:0004829other enzyme activity
AT5G26830AT5G26830tRNA aminoacylation for protein translationGO:0006418protein metabolism
AT5G26830AT5G26830tRNA aminoacylation for protein translationGO:0006418other cellular processes
AT5G26830AT5G26830tRNA aminoacylation for protein translationGO:0006418other metabolic processes
AT5G26830AT5G26830translationGO:0006412protein metabolism
AT5G26830AT5G26830translationGO:0006412other cellular processes
AT5G26830AT5G26830translationGO:0006412other metabolic processes
AT5G26830AT5G26830threonyl-tRNA aminoacylationGO:0006435protein metabolism
AT5G26830AT5G26830threonyl-tRNA aminoacylationGO:0006435other cellular processes
AT5G26830AT5G26830threonyl-tRNA aminoacylationGO:0006435other metabolic processes
AT5G26830AT5G26830tRNA aminoacylationGO:0043039other cellular processes
AT5G26830AT5G26830tRNA aminoacylationGO:0043039other metabolic processes
AT5G26830AT5G26830chloroplastGO:0009507chloroplast
AT5G26830AT5G26830mitochondrionGO:0005739mitochondria
AT5G26830AT5G26830threonine-tRNA ligase activityGO:0004829other enzyme activity
AT5G26830AT5G26830threonyl-tRNA aminoacylationGO:0006435protein metabolism
AT5G26830AT5G26830threonyl-tRNA aminoacylationGO:0006435other cellular processes
AT5G26830AT5G26830threonyl-tRNA aminoacylationGO:0006435other metabolic processes

Gene Network Informations
Gene NetworkInteract with..
ConsensusfromContig1004[interact with..]ConsensusfromContig3661
ConsensusfromContig4018
ConsensusfromContig4685
ConsensusfromContig5878
ConsensusfromContig8423
FXQQ4OB01AIW9N
FXQQ4OB01EAFAU
Singletons2963
ConsensusfromContig5001
ConsensusfromContig1004
EICPS014_B03_pDNR-F
Singletons22299
ConsensusfromContig3680
contig07406
EICPM045_F06_pDNR-F
Singletons40332
Singletons46717
Singletons47690

Query NameLength of queryGenBankAccession number(Best hits in the GenBank)AnnotationSpeciesLength of homologous protein(Amino Acid)ScoreExpect valueIdentitiessimilarityFrame
ConsensusfromContig3661_Average_coverage__3.211416gbAAT02535.1 NADP-dependent malic enzyme 3 Hydrilla verticillata575613 bits (1580)e-173304/389 (78%)333/389 (85%) -2
ConsensusfromContig4018_Average_coverage__1.971002gbAAT02535.1 NADP-dependent malic enzyme 3 Hydrilla verticillata575392 bits (1007)e-107191/227 (84%)208/227 (91%) -1
ConsensusfromContig4685_Average_coverage__1.63263dbjBAA24950.1 NADP-malic enzyme Aloe arborescens592167 bits (422)5e-4075/87 (86%)85/87 (97%) -2
ConsensusfromContig5878_Average_coverage__3.971939dbjBAA24950.1 NADP-malic enzyme Aloe arborescens592520 bits (1340)0.0252/299 (84%)273/299 (91%) +1
ConsensusfromContig8423_Average_coverage__1.921207gbAAT02535.1 NADP-dependent malic enzyme 3 Hydrilla verticillata575545 bits (1405)e-153267/313 (85%)294/313 (93%) -2
FXQQ4OB01AIW9NdbjBAA24950.1 NADP-malic enzyme Aloe arborescens59291.7 bits (226)2e-1744/55 (80%)46/55 (83%) +2
FXQQ4OB01EAFAUdbjBAA24950.1 NADP-malic enzyme Aloe arborescens592104 bits (260)3e-2150/61 (81%)52/61 (85%) +3
Singletons29632223dbjBAA24950.1 NADP-malic enzyme Aloe arborescens5921053 bits (2722)0.0522/592 (88%)552/592 (93%) -1
Singletons29630124[No hits found]
Singletons29632124[No hits found]
Singletons29633124[No hits found]
Singletons29634124[No hits found]
Singletons29635124[No hits found]
Singletons29636124[No hits found]
Singletons29637124[No hits found]
Singletons29639124[No hits found]
ConsensusfromContig5001_Average_coverage__1.52249refXP_002521479.1 aldose 1-epimerase, putative Ricinus communis306112 bits (281)1e-2353/66 (80%)61/66 (92%) +3
ConsensusfromContig1004_Average_coverage__1.97706embCBI39735.1 unnamed protein product Vitis vinifera686391 bits (1004)e-107189/232 (81%)204/232 (87%) +3
EICPS014_B03_pDNR-F820embCBI39735.1 unnamed protein product Vitis vinifera686136 bits (343)5e-3278/152 (51%)98/152 (64%) +3
Singletons222992519embCBI39735.1 unnamed protein product Vitis vinifera6861080 bits (2793)0.0525/676 (77%)581/676 (85%) -1
ConsensusfromContig3680_Average_coverage__1.09328spO81983.1SYS_HELAN RecName: Full=Seryl-tRNA synthetase; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase; AltName:438147 bits (371)4e-3474/109 (67%)88/109 (80%) +2
contig07406362dbjBAD87949.1 putative seryl-tRNA synthetase Oryza sativa Japonica Group400225 bits (573)1e-57100/119 (84%)112/119 (94%) +3
EICPM045_F06_pDNR-F1040refNP_001043340.1 Os01g0559100 Oryza sativa (japonica cultivar-group)425412 bits (1058)e-135193/260 (74%)230/260 (88%) +2
Singletons40332243refNP_001105110.1 seryl-tRNA synthetase1 Zea mays457146 bits (368)8e-3467/81 (82%)76/81 (93%) -1
Singletons46717508spO81983.1SYS_HELAN RecName: Full=Seryl-tRNA synthetase; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase; AltName:438197 bits (502)3e-4997/137 (70%)116/137 (84%) -2
Singletons47690655refNP_001043340.1 Os01g0559100 Oryza sativa (japonica cultivar-group)425362 bits (928)2e-98168/201 (83%)186/201 (92%) +1