Contig View

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Library Name: Contig Lists:

Contig Information:

Project Name	Query Name	Length of query
FPTEVCPM	Contig0056	1131

Contig Map:

(ProjectName=FPTEVCPM SequenceName=Contig0056):
FPTEVCPM088_D12_PDNR-F:
FPTEVCPM090_G08_PDNR-F:
FPTEVCPM092_A11_PDNR-F:
FPTEVCPM091_G01_PDNR-F:
FPTEVCPM066_G03_PDNR-F:
FPTEVCPM040_B12_PDNR-F:
FPTEVCPM087_D05_PDNR-F:
FPTEVCPM088_D06_PDNR-F:
FPTEVCPM051_B10_PDNR-F:
FPTEVCPM056_E01_PDNR-F:
FPTEVCPM090_B10_PDNR-F:
FPTEVCPM063_H12_PDNR-F:
FPTEVCPM087_A06_PDNR-F:
FPTEVCPM004_F03_pDNR-F:
FPTEVCPM071_C03_PDNR-F:
FPTEVCPM047_E04_PDNR-F:
FPTEVCPM044_B08_PDNR-F:
FPTEVCPM083_B03_PDNR-F:
FPTEVCPM050_G01_PDNR-F:
FPTEVCPM092_D10_PDNR-F:

Sequences View:[Contig0056](Contig Seguence)

1131 bases 
GAATCAACCCTGAACATAATCTAACACATTCCAACACCCGCAATGGCAGCCACAGCAGCCACAATGGCCCTCTCTTCTCCTTCTTTCGCTGGTAAGGCGGTTAAAATCTCGCCCTCCAACGTTCTCATCTTTGGCGAGGGCCGCATCACCATGCAGGATAAGACTACATCGAACAGGCCCCGGACTACAGCAGGAAAGTTACGCCCCGCAACTAGCAGCCCATGGTATGGCCCGGACCGTGTGAAGTATTTGGGCCCGTTCTCTGGCGAGCCACCTTCATACCTCACTGGCGAGTTCCCCGGTGATTACGGCTGGGACACTGCTGGCTTGTCGGCGGACCCAGAAACCTTCGCTAAGAATCGGGAGCTGGAGGTCATCCACTCACGGTGGGCCATGTTGGGTGCACTGGGTTGCATCTTCCCAGAGCTTTTGGCTCGCAATGGCGTAAAGTTCGGCGAGGCGGTGTGGTTCAAAGCTGGTTCTCAGATCTTCAGCGAGGGTGGGCTTGATTATTTGGGTAACCCAAACTTGATCCATGCTCAAAGCATCTTGGCTATCTGGGCAGTTCAAGTTGTCCTCATGGGTGCTGTTGAGGGCTATCGTATTGCCGGTGGTCCTCTCGGCGAGATCACCGACCCGCTTTACCCAGGCAATAGCTTCGACCCGCTGGGCTTGGCCGACGACCCCGAGGCCTTTGCTGAGCTGAAGGTGAAGGAGTTAAAGAATGGTAGGCTGGCAATGTTCTCTATGTTTGGTTTTTTCGTGCAGGCGATTGTCACTGGAAAGGGACCGCTGGAGAACTTGGCCGACCACCTTGCTGACCCGGTGAACAATAACGCCTGGGCTTATGCCACGAACTTTGTTCCTGGAAAGTGAGGAGTTTAAGTTCAGATTTAATTGACTATGGCTTGCTTGGTGCTAGTTCCTTTGAGTTGGACGTGTAAAACAAGTAGTTTAGCTTGAGAGTTTCAATGTACGTGCGTTGGAGAGCAATCATCAATATTATGAACTGTTGTACAGTAACATTTTCTTGATGATGTGTTAATCTCTTTTTCTTTTGTTTTATTTATCTTTTCAAGAATCATTATTTACATTGTTTGGTGAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Sequences View:[Contig0056](Singleton Sequence)

Contig0056 1131  bases 
GAATCAACCCTGAACATAATCTAACACATTCCAACACCCGCAATGGCAGCCACAGCAGCCACAATGGCCCTCTCTTCTCCTTCTTTCGCTGGTAAGGCGGTTAAAATCTCGCCCTCCAACGTTCTCATCTTTGGCGAGGGCCGCATCACCATGCAGGATAAGACTACATCGAACAGGCCCCGGACTACAGCAGGAAAGTTACGCCCCGCAACTAGCAGCCCATGGTATGGCCCGGACCGTGTGAAGTATTTGGGCCCGTTCTCTGGCGAGCCACCTTCATACCTCACTGGCGAGTTCCCCGGTGATTACGGCTGGGACACTGCTGGCTTGTCGGCGGACCCAGAAACCTTCGCTAAGAATCGGGAGCTGGAGGTCATCCACTCACGGTGGGCCATGTTGGGTGCACTGGGTTGCATCTTCCCAGAGCTTTTGGCTCGCAATGGCGTAAAGTTCGGCGAGGCGGTGTGGTTCAAAGCTGGTTCTCAGATCTTCAGCGAGGGTGGGCTTGATTATTTGGGTAACCCAAACTTGATCCATGCTCAAAGCATCTTGGCTATCTGGGCAGTTCAAGTTGTCCTCATGGGTGCTGTTGAGGGCTATCGTATTGCCGGTGGTCCTCTCGGCGAGATCACCGACCCGCTTTACCCAGGCAATAGCTTCGACCCGCTGGGCTTGGCCGACGACCCCGAGGCCTTTGCTGAGCTGAAGGTGAAGGAGTTAAAGAATGGTAGGCTGGCAATGTTCTCTATGTTTGGTTTTTTCGTGCAGGCGATTGTCACTGGAAAGGGACCGCTGGAGAACTTGGCCGACCACCTTGCTGACCCGGTGAACAATAACGCCTGGGCTTATGCCACGAACTTTGTTCCTGGAAAGTGAGGAGTTTAAGTTCAGATTTAATTGACTATGGCTTGCTTGGTGCTAGTTCCTTTGAGTTGGACGTGTAAAACAAGTAGTTTAGCTTGAGAGTTTCAATGTACGTGCGTTGGAGAGCAATCATCAATATTATGAACTGTTGTACAGTAACATTTTCTTGATGATGTGTTAATCTCTTTTTCTTTTGTTTTATTTATCTTTTCAAGAATCATTATTTACATTGTTTGGTGAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Contig Annotation:

GenBank	Accession number (Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
gb	AAD21625.1	putative chlorophyll a/b-binding protein	Phalaenopsis hybrid cultivar	277	552 bits (1422)	e-155	268/268 (100%)	268/268 (100%)	+1

KEGG Pathway	GO
Contig0056[1 Pathway]	Contig0056[48 GoTerm]

Pathway Informations
First-level terms	Second-level terms	KEGG pathway Num	KEGG pathway Name	KEGG pathway Description	contig Name	locusName	project Name
Metabolism	Energy Metabolism	00196	Photosynthesis - antenna proteins	[PATH:ath00196]	Contig0056	AT1G29930	FPTEVCPM

GO Informations
Locus Name	Go Name	Go Class Descriptions	GO id	Anotations01
AT1G29930	AT1G29930	chloroplast	GO:0009507	chloroplast
AT1G29930	AT1G29930	chloroplast	GO:0009507	chloroplast
AT1G29930	AT1G29930	thylakoid	GO:0009579	other intracellular components
AT1G29930	AT1G29930	chloroplast thylakoid membrane	GO:0009535	plastid
AT1G29930	AT1G29930	chloroplast thylakoid membrane	GO:0009535	plastid
AT1G29930	AT1G29930	chloroplast thylakoid membrane	GO:0009535	chloroplast
AT1G29930	AT1G29930	chloroplast thylakoid membrane	GO:0009535	chloroplast
AT1G29930	AT1G29930	chloroplast thylakoid membrane	GO:0009535	other membranes
AT1G29930	AT1G29930	chloroplast thylakoid membrane	GO:0009535	other membranes
AT1G29930	AT1G29930	chloroplast thylakoid membrane	GO:0009535	other cytoplasmic components
AT1G29930	AT1G29930	chloroplast thylakoid membrane	GO:0009535	other cytoplasmic components
AT1G29930	AT1G29930	chloroplast thylakoid membrane	GO:0009535	other intracellular components
AT1G29930	AT1G29930	chloroplast thylakoid membrane	GO:0009535	other intracellular components
AT1G29930	AT1G29930	chloroplast thylakoid membrane	GO:0009535	plastid
AT1G29930	AT1G29930	chloroplast thylakoid membrane	GO:0009535	chloroplast
AT1G29930	AT1G29930	chloroplast thylakoid membrane	GO:0009535	other membranes
AT1G29930	AT1G29930	chloroplast thylakoid membrane	GO:0009535	other cytoplasmic components
AT1G29930	AT1G29930	chloroplast thylakoid membrane	GO:0009535	other intracellular components
AT1G29930	AT1G29930	chlorophyll binding	GO:0016168	other binding
AT1G29930	AT1G29930	chlorophyll binding	GO:0016168	other binding
AT1G29930	AT1G29930	chlorophyll binding	GO:0016168	other binding
AT1G29930	AT1G29930	photosynthesis	GO:0015979	other cellular processes
AT1G29930	AT1G29930	photosynthesis	GO:0015979	other metabolic processes
AT1G29930	AT1G29930	light-harvesting complex	GO:0030076	other intracellular components
AT1G29930	AT1G29930	chloroplast	GO:0009507	chloroplast
AT1G29930	AT1G29930	chloroplast	GO:0009507	chloroplast
AT1G29930	AT1G29930	thylakoid	GO:0009579	other intracellular components
AT1G29930	AT1G29930	chloroplast thylakoid membrane	GO:0009535	plastid
AT1G29930	AT1G29930	chloroplast thylakoid membrane	GO:0009535	plastid
AT1G29930	AT1G29930	chloroplast thylakoid membrane	GO:0009535	chloroplast
AT1G29930	AT1G29930	chloroplast thylakoid membrane	GO:0009535	chloroplast
AT1G29930	AT1G29930	chloroplast thylakoid membrane	GO:0009535	other membranes
AT1G29930	AT1G29930	chloroplast thylakoid membrane	GO:0009535	other membranes
AT1G29930	AT1G29930	chloroplast thylakoid membrane	GO:0009535	other cytoplasmic components
AT1G29930	AT1G29930	chloroplast thylakoid membrane	GO:0009535	other cytoplasmic components
AT1G29930	AT1G29930	chloroplast thylakoid membrane	GO:0009535	other intracellular components
AT1G29930	AT1G29930	chloroplast thylakoid membrane	GO:0009535	other intracellular components
AT1G29930	AT1G29930	chloroplast thylakoid membrane	GO:0009535	plastid
AT1G29930	AT1G29930	chloroplast thylakoid membrane	GO:0009535	chloroplast
AT1G29930	AT1G29930	chloroplast thylakoid membrane	GO:0009535	other membranes
AT1G29930	AT1G29930	chloroplast thylakoid membrane	GO:0009535	other cytoplasmic components
AT1G29930	AT1G29930	chloroplast thylakoid membrane	GO:0009535	other intracellular components
AT1G29930	AT1G29930	chlorophyll binding	GO:0016168	other binding
AT1G29930	AT1G29930	chlorophyll binding	GO:0016168	other binding
AT1G29930	AT1G29930	chlorophyll binding	GO:0016168	other binding
AT1G29930	AT1G29930	photosynthesis	GO:0015979	other cellular processes
AT1G29930	AT1G29930	photosynthesis	GO:0015979	other metabolic processes
AT1G29930	AT1G29930	light-harvesting complex	GO:0030076	other intracellular components

Gene Network Informations
Gene Network	Interact with..
Contig0056[interact with..]	Not found!