Contig View

Back [Phalaenopsis Transcriptome]

Library Name: Contig Lists:

Contig Information:

Project Name	Query Name	Length of query
FPTEVCPM	Contig0051	690

Contig Map:

(ProjectName=FPTEVCPM SequenceName=Contig0051):
FPTEVCPM043_B01_PDNR-F:
FPTEVCPM082_G07_PDNR-F:
FPTEVCPM043_H01_PDNR-F:

Sequences View:[Contig0051](Contig Seguence)

Sequences View:[Contig0051](Singleton Sequence)

Contig Annotation:

GenBank	Accession number (Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
ref	XP_002282974.1	PREDICTED: similar to protein synthesis initiation factor-like	Vitis vinifera	92	188 bits (478)	2e-46	91/92 (98%)	92/92 (100%)	+2

KEGG Pathway	GO
Contig0051[1 Pathway]	Contig0051[14 GoTerm]

Pathway Informations
First-level terms	Second-level terms	KEGG pathway Num	KEGG pathway Name	KEGG pathway Description	contig Name	locusName	project Name
Genetic Information Processing	Translation	03010	Ribosome	[PATH:ath03010]	Contig0051	AT3G10950	FPTEVCPM

GO Informations
Locus Name	Go Name	Go Class Descriptions	GO id	Anotations01
AT3G10950	AT3G10950	structural constituent of ribosome	GO:0003735	structural molecule activity
AT3G10950	AT3G10950	translation	GO:0006412	protein metabolism
AT3G10950	AT3G10950	translation	GO:0006412	other cellular processes
AT3G10950	AT3G10950	translation	GO:0006412	other metabolic processes
AT3G10950	AT3G10950	ribosome	GO:0005840	ribosome
AT3G10950	AT3G10950	structural constituent of ribosome	GO:0003735	structural molecule activity
AT3G10950	AT3G10950	translation	GO:0006412	protein metabolism
AT3G10950	AT3G10950	translation	GO:0006412	other cellular processes
AT3G10950	AT3G10950	translation	GO:0006412	other metabolic processes
AT3G10950	AT3G10950	ribosome biogenesis	GO:0042254	cell organization and biogenesis
AT3G10950	AT3G10950	cytosolic large ribosomal subunit	GO:0022625	cytosol
AT3G10950	AT3G10950	cytosolic large ribosomal subunit	GO:0022625	ribosome
AT3G10950	AT3G10950	cytosolic large ribosomal subunit	GO:0022625	other cytoplasmic components
AT3G10950	AT3G10950	cytosolic large ribosomal subunit	GO:0022625	other intracellular components

Gene Network Informations
Gene Network	Interact with..
Contig0051[interact with..]	Not found!