Contig View

Back [Phalaenopsis Transcriptome]

Library Name: Contig Lists:

Contig Information:

Project Name	Query Name	Length of query
FPTEVCPM	Contig0043	753

Contig Map:

(ProjectName=FPTEVCPM SequenceName=Contig0043):
FPTEVCPM019_C07_pNDR-F:
FPTEVCPM053_D02_PDNR-F:
FPTEVCPM042_C07_pDNR-F:
FPTEVCPM034_F02_PDNR-F:
FPTEVCPM080_E07_PDNR-F:

Sequences View:[Contig0043](Contig Seguence)

Sequences View:[Contig0043](Singleton Sequence)

Contig Annotation:

GenBank	Accession number (Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
ref	XP_002530279.1	60S ribosomal protein L12, putative	Ricinus communis	166	300 bits (768)	9e-80	150/162 (92%)	160/162 (98%)	+3

KEGG Pathway	GO
Contig0043[1 Pathway]	Contig0043[15 GoTerm]

Pathway Informations
First-level terms	Second-level terms	KEGG pathway Num	KEGG pathway Name	KEGG pathway Description	contig Name	locusName	project Name
Genetic Information Processing	Translation	03010	Ribosome	[PATH:ath03010]	Contig0043	AT5G60670	FPTEVCPM

GO Informations
Locus Name	Go Name	Go Class Descriptions	GO id	Anotations01
AT5G60670	AT5G60670	structural constituent of ribosome	GO:0003735	structural molecule activity
AT5G60670	AT5G60670	translation	GO:0006412	protein metabolism
AT5G60670	AT5G60670	translation	GO:0006412	other cellular processes
AT5G60670	AT5G60670	translation	GO:0006412	other metabolic processes
AT5G60670	AT5G60670	ribosome	GO:0005840	ribosome
AT5G60670	AT5G60670	structural constituent of ribosome	GO:0003735	structural molecule activity
AT5G60670	AT5G60670	ribosome biogenesis	GO:0042254	cell organization and biogenesis
AT5G60670	AT5G60670	cytosolic large ribosomal subunit	GO:0022625	cytosol
AT5G60670	AT5G60670	cytosolic large ribosomal subunit	GO:0022625	cytosol
AT5G60670	AT5G60670	cytosolic large ribosomal subunit	GO:0022625	ribosome
AT5G60670	AT5G60670	cytosolic large ribosomal subunit	GO:0022625	ribosome
AT5G60670	AT5G60670	cytosolic large ribosomal subunit	GO:0022625	other cytoplasmic components
AT5G60670	AT5G60670	cytosolic large ribosomal subunit	GO:0022625	other cytoplasmic components
AT5G60670	AT5G60670	cytosolic large ribosomal subunit	GO:0022625	other intracellular components
AT5G60670	AT5G60670	cytosolic large ribosomal subunit	GO:0022625	other intracellular components

Gene Network Informations
Gene Network	Interact with..
Contig0043[interact with..]	Not found!